Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC14.66□□□□□ -0.06
HIST1H1DP16402 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC14.66□□□□□ -0.06
HIST1H1DP16402 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H1DP16402 AC092597.1-201ENST00000487352 616 ntBASIC14.66□□□□□ -0.06
HIST1H1DP16402 COX11P1-201ENST00000489116 835 ntBASIC14.66□□□□□ -0.06
HIST1H1DP16402 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC14.66□□□□□ -0.06
HIST1H1DP16402 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC14.66□□□□□ -0.06
HIST1H1DP16402 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
HIST1H1DP16402 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.66□□□□□ -0.06
HIST1H1DP16402 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.66□□□□□ -0.06
HIST1H1DP16402 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.66□□□□□ -0.06
HIST1H1DP16402 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H1DP16402 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H1DP16402 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H1DP16402 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
HIST1H1DP16402 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H1DP16402 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.66□□□□□ -0.06
HIST1H1DP16402 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.66□□□□□ -0.06
HIST1H1DP16402 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC14.66□□□□□ -0.06
HIST1H1DP16402 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H1DP16402 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.65□□□□□ -0.06
HIST1H1DP16402 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H1DP16402 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H1DP16402 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H1DP16402 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H1DP16402 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H1DP16402 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H1DP16402 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H1DP16402 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.65□□□□□ -0.06
HIST1H1DP16402 AC079328.2-201ENST00000561241 3354 ntBASIC14.65□□□□□ -0.06
HIST1H1DP16402 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H1DP16402 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
HIST1H1DP16402 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14.65□□□□□ -0.06
HIST1H1DP16402 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H1DP16402 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H1DP16402 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H1DP16402 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC14.65□□□□□ -0.06
HIST1H1DP16402 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
HIST1H1DP16402 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
HIST1H1DP16402 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H1DP16402 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H1DP16402 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H1DP16402 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
HIST1H1DP16402 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.65□□□□□ -0.06
HIST1H1DP16402 AL391005.1-201ENST00000623953 2435 ntBASIC14.65□□□□□ -0.06
HIST1H1DP16402 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.65□□□□□ -0.06
HIST1H1DP16402 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.65□□□□□ -0.06
HIST1H1DP16402 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H1DP16402 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.65□□□□□ -0.06
HIST1H1DP16402 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H1DP16402 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.65□□□□□ -0.06
HIST1H1DP16402 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H1DP16402 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H1DP16402 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
HIST1H1DP16402 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
HIST1H1DP16402 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HIST1H1DP16402 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HIST1H1DP16402 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.64□□□□□ -0.07
HIST1H1DP16402 AL162727.3-201ENST00000635661 2787 ntBASIC14.64□□□□□ -0.07
HIST1H1DP16402 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.64□□□□□ -0.07
HIST1H1DP16402 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
HIST1H1DP16402 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST1H1DP16402 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST1H1DP16402 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST1H1DP16402 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HIST1H1DP16402 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
HIST1H1DP16402 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST1H1DP16402 LINC02199-201ENST00000506655 2702 ntBASIC14.64□□□□□ -0.07
HIST1H1DP16402 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST1H1DP16402 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST1H1DP16402 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST1H1DP16402 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST1H1DP16402 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST1H1DP16402 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC14.64□□□□□ -0.07
HIST1H1DP16402 AC007967.3-201ENST00000434308 558 ntBASIC14.64□□□□□ -0.07
HIST1H1DP16402 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST1H1DP16402 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.64□□□□□ -0.07
HIST1H1DP16402 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.64□□□□□ -0.07
HIST1H1DP16402 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.64□□□□□ -0.07
HIST1H1DP16402 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC14.64□□□□□ -0.07
HIST1H1DP16402 AC005332.3-201ENST00000589904 676 ntBASIC14.64□□□□□ -0.07
HIST1H1DP16402 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.64□□□□□ -0.07
HIST1H1DP16402 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST1H1DP16402 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HIST1H1DP16402 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST1H1DP16402 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
HIST1H1DP16402 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST1H1DP16402 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.64□□□□□ -0.07
HIST1H1DP16402 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST1H1DP16402 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST1H1DP16402 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
HIST1H1DP16402 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
HIST1H1DP16402 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.64□□□□□ -0.07
HIST1H1DP16402 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HIST1H1DP16402 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST1H1DP16402 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
HIST1H1DP16402 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST1H1DP16402 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.64□□□□□ -0.07
HIST1H1DP16402 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST1H1DP16402 AC008894.3-201ENST00000624324 3103 ntBASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms