Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDGFAP04085 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDGFAP04085 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDGFAP04085 GPR89P-201ENST00000407924 1495 ntBASIC16.16■□□□□ 0.18
PDGFAP04085 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PDGFAP04085 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PDGFAP04085 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.16■□□□□ 0.18
PDGFAP04085 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDGFAP04085 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDGFAP04085 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
PDGFAP04085 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDGFAP04085 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDGFAP04085 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PDGFAP04085 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PDGFAP04085 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDGFAP04085 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.15■□□□□ 0.18
PDGFAP04085 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDGFAP04085 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PDGFAP04085 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDGFAP04085 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDGFAP04085 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDGFAP04085 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PDGFAP04085 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDGFAP04085 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDGFAP04085 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDGFAP04085 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.15■□□□□ 0.18
PDGFAP04085 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PDGFAP04085 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDGFAP04085 COX5BP2-201ENST00000392354 334 ntBASIC16.15■□□□□ 0.18
PDGFAP04085 CNN2P11-201ENST00000429351 262 ntBASIC16.15■□□□□ 0.18
PDGFAP04085 AC103564.2-201ENST00000432853 1299 ntBASIC16.15■□□□□ 0.18
PDGFAP04085 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.15■□□□□ 0.18
PDGFAP04085 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.15■□□□□ 0.18
PDGFAP04085 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.15■□□□□ 0.18
PDGFAP04085 MIR3197-201ENST00000582241 73 ntBASIC16.15■□□□□ 0.18
PDGFAP04085 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.15■□□□□ 0.18
PDGFAP04085 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PDGFAP04085 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.15■□□□□ 0.18
PDGFAP04085 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.15■□□□□ 0.18
PDGFAP04085 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PDGFAP04085 AC004790.2-201ENST00000623588 572 ntBASIC16.15■□□□□ 0.18
PDGFAP04085 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDGFAP04085 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDGFAP04085 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.15■□□□□ 0.18
PDGFAP04085 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDGFAP04085 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDGFAP04085 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.18
PDGFAP04085 AL596257.1-201ENST00000641463 2694 ntBASIC16.14■□□□□ 0.17
PDGFAP04085 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PDGFAP04085 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.14■□□□□ 0.17
PDGFAP04085 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDGFAP04085 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDGFAP04085 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDGFAP04085 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDGFAP04085 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDGFAP04085 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PDGFAP04085 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.14■□□□□ 0.17
PDGFAP04085 RPS15P9-201ENST00000494093 319 ntBASIC16.14■□□□□ 0.17
PDGFAP04085 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PDGFAP04085 IGHV3-65-201ENST00000523210 341 ntBASIC16.14■□□□□ 0.17
PDGFAP04085 AC126763.1-201ENST00000552015 2118 ntBASIC16.14■□□□□ 0.17
PDGFAP04085 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.14■□□□□ 0.17
PDGFAP04085 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.14■□□□□ 0.17
PDGFAP04085 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.14■□□□□ 0.17
PDGFAP04085 AL353593.2-201ENST00000602529 1483 ntBASIC16.14■□□□□ 0.17
PDGFAP04085 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDGFAP04085 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.14■□□□□ 0.17
PDGFAP04085 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PDGFAP04085 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.14■□□□□ 0.17
PDGFAP04085 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDGFAP04085 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDGFAP04085 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PDGFAP04085 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.14■□□□□ 0.17
PDGFAP04085 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PDGFAP04085 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PDGFAP04085 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
PDGFAP04085 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.13■□□□□ 0.17
PDGFAP04085 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDGFAP04085 AL049757.1-201ENST00000616842 1596 ntBASIC16.13■□□□□ 0.17
PDGFAP04085 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDGFAP04085 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.13■□□□□ 0.17
PDGFAP04085 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.13■□□□□ 0.17
PDGFAP04085 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PDGFAP04085 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDGFAP04085 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDGFAP04085 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PDGFAP04085 IGLL3P-201ENST00000412472 434 ntBASIC16.13■□□□□ 0.17
PDGFAP04085 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.13■□□□□ 0.17
PDGFAP04085 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.13■□□□□ 0.17
PDGFAP04085 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.13■□□□□ 0.17
PDGFAP04085 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
PDGFAP04085 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PDGFAP04085 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PDGFAP04085 AC008667.4-201ENST00000607370 168 ntBASIC16.13■□□□□ 0.17
PDGFAP04085 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PDGFAP04085 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDGFAP04085 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDGFAP04085 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.13■□□□□ 0.17
PDGFAP04085 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDGFAP04085 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms