Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.2□□□□□ -0.14
SCAF4O95104 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SCAF4O95104 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
SCAF4O95104 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SCAF4O95104 AC092338.2-201ENST00000568827 1415 ntBASIC14.2□□□□□ -0.14
SCAF4O95104 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
SCAF4O95104 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SCAF4O95104 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SCAF4O95104 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SCAF4O95104 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SCAF4O95104 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SCAF4O95104 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SCAF4O95104 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC14.2□□□□□ -0.14
SCAF4O95104 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SCAF4O95104 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SCAF4O95104 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
SCAF4O95104 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SCAF4O95104 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SCAF4O95104 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SCAF4O95104 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCAF4O95104 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCAF4O95104 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC14.19□□□□□ -0.14
SCAF4O95104 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCAF4O95104 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.19□□□□□ -0.14
SCAF4O95104 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCAF4O95104 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCAF4O95104 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCAF4O95104 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SCAF4O95104 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCAF4O95104 AC026691.1-201ENST00000602502 2017 ntBASIC14.19□□□□□ -0.14
SCAF4O95104 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC14.19□□□□□ -0.14
SCAF4O95104 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SCAF4O95104 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.19□□□□□ -0.14
SCAF4O95104 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.19□□□□□ -0.14
SCAF4O95104 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
SCAF4O95104 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.19□□□□□ -0.14
SCAF4O95104 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SCAF4O95104 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC14.19□□□□□ -0.14
SCAF4O95104 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCAF4O95104 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.19□□□□□ -0.14
SCAF4O95104 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCAF4O95104 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCAF4O95104 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SCAF4O95104 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
SCAF4O95104 AL137013.1-201ENST00000432946 1228 ntBASIC14.19□□□□□ -0.14
SCAF4O95104 PHB2-202ENST00000440277 996 ntTSL 5 BASIC14.19□□□□□ -0.14
SCAF4O95104 SLC25A3P1-201ENST00000443844 931 ntBASIC14.19□□□□□ -0.14
SCAF4O95104 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.19□□□□□ -0.14
SCAF4O95104 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC14.19□□□□□ -0.14
SCAF4O95104 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SCAF4O95104 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC14.19□□□□□ -0.14
SCAF4O95104 KRT18P21-201ENST00000515767 1272 ntBASIC14.19□□□□□ -0.14
SCAF4O95104 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCAF4O95104 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC14.19□□□□□ -0.14
SCAF4O95104 GPX4-207ENST00000589115 812 ntTSL 2 BASIC14.19□□□□□ -0.14
SCAF4O95104 AC012306.2-201ENST00000609350 630 ntBASIC14.19□□□□□ -0.14
SCAF4O95104 FAM87A-204ENST00000613235 858 ntBASIC14.19□□□□□ -0.14
SCAF4O95104 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SCAF4O95104 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCAF4O95104 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SCAF4O95104 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCAF4O95104 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC14.19□□□□□ -0.14
SCAF4O95104 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCAF4O95104 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SCAF4O95104 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SCAF4O95104 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCAF4O95104 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCAF4O95104 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCAF4O95104 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCAF4O95104 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SCAF4O95104 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCAF4O95104 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.19□□□□□ -0.14
SCAF4O95104 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SCAF4O95104 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCAF4O95104 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCAF4O95104 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.19□□□□□ -0.14
SCAF4O95104 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SCAF4O95104 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SCAF4O95104 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SCAF4O95104 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SCAF4O95104 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SCAF4O95104 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SCAF4O95104 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC14.18□□□□□ -0.14
SCAF4O95104 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SCAF4O95104 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.18□□□□□ -0.14
SCAF4O95104 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SCAF4O95104 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC14.18□□□□□ -0.14
SCAF4O95104 HMGA1P5-201ENST00000412453 271 ntBASIC14.18□□□□□ -0.14
SCAF4O95104 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SCAF4O95104 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC14.18□□□□□ -0.14
SCAF4O95104 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.18□□□□□ -0.14
SCAF4O95104 AC010653.2-201ENST00000623505 997 ntBASIC14.18□□□□□ -0.14
SCAF4O95104 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SCAF4O95104 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC14.18□□□□□ -0.14
SCAF4O95104 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SCAF4O95104 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
SCAF4O95104 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SCAF4O95104 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SCAF4O95104 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.18□□□□□ -0.14
SCAF4O95104 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms