Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TRABD2BA6NFA1 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRABD2BA6NFA1 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TRABD2BA6NFA1 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRABD2BA6NFA1 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRABD2BA6NFA1 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRABD2BA6NFA1 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.57■□□□□ 0.24
TRABD2BA6NFA1 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRABD2BA6NFA1 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRABD2BA6NFA1 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.57■□□□□ 0.24
TRABD2BA6NFA1 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRABD2BA6NFA1 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRABD2BA6NFA1 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.57■□□□□ 0.24
TRABD2BA6NFA1 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRABD2BA6NFA1 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRABD2BA6NFA1 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
TRABD2BA6NFA1 CXCL1P1-201ENST00000502804 216 ntBASIC16.57■□□□□ 0.24
TRABD2BA6NFA1 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.57■□□□□ 0.24
TRABD2BA6NFA1 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRABD2BA6NFA1 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.57■□□□□ 0.24
TRABD2BA6NFA1 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.57■□□□□ 0.24
TRABD2BA6NFA1 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRABD2BA6NFA1 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.57■□□□□ 0.24
TRABD2BA6NFA1 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRABD2BA6NFA1 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRABD2BA6NFA1 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.57■□□□□ 0.24
TRABD2BA6NFA1 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.57■□□□□ 0.24
TRABD2BA6NFA1 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TRABD2BA6NFA1 AC126763.1-201ENST00000552015 2118 ntBASIC16.57■□□□□ 0.24
TRABD2BA6NFA1 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.57■□□□□ 0.24
TRABD2BA6NFA1 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRABD2BA6NFA1 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRABD2BA6NFA1 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRABD2BA6NFA1 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.56■□□□□ 0.24
TRABD2BA6NFA1 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRABD2BA6NFA1 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRABD2BA6NFA1 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRABD2BA6NFA1 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.56■□□□□ 0.24
TRABD2BA6NFA1 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
TRABD2BA6NFA1 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TRABD2BA6NFA1 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TRABD2BA6NFA1 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
TRABD2BA6NFA1 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.56■□□□□ 0.24
TRABD2BA6NFA1 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.56■□□□□ 0.24
TRABD2BA6NFA1 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TRABD2BA6NFA1 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.56■□□□□ 0.24
TRABD2BA6NFA1 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRABD2BA6NFA1 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.56■□□□□ 0.24
TRABD2BA6NFA1 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRABD2BA6NFA1 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
TRABD2BA6NFA1 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRABD2BA6NFA1 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.56■□□□□ 0.24
TRABD2BA6NFA1 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.56■□□□□ 0.24
TRABD2BA6NFA1 BASP1P1-201ENST00000430708 665 ntBASIC16.56■□□□□ 0.24
TRABD2BA6NFA1 AC055876.3-201ENST00000431496 288 ntBASIC16.56■□□□□ 0.24
TRABD2BA6NFA1 AC002472.2-201ENST00000442739 958 ntBASIC16.56■□□□□ 0.24
TRABD2BA6NFA1 TSPY16P-201ENST00000449843 468 ntBASIC16.56■□□□□ 0.24
TRABD2BA6NFA1 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TRABD2BA6NFA1 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRABD2BA6NFA1 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
TRABD2BA6NFA1 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRABD2BA6NFA1 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.56■□□□□ 0.24
TRABD2BA6NFA1 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRABD2BA6NFA1 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.56■□□□□ 0.24
TRABD2BA6NFA1 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.56■□□□□ 0.24
TRABD2BA6NFA1 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.56■□□□□ 0.24
TRABD2BA6NFA1 AC138649.4-201ENST00000612222 287 ntBASIC16.56■□□□□ 0.24
TRABD2BA6NFA1 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.56■□□□□ 0.24
TRABD2BA6NFA1 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.56■□□□□ 0.24
TRABD2BA6NFA1 AC097637.2-201ENST00000624096 1997 ntBASIC16.56■□□□□ 0.24
TRABD2BA6NFA1 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
TRABD2BA6NFA1 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.56■□□□□ 0.24
TRABD2BA6NFA1 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRABD2BA6NFA1 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.56■□□□□ 0.24
TRABD2BA6NFA1 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRABD2BA6NFA1 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.55■□□□□ 0.24
TRABD2BA6NFA1 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.55■□□□□ 0.24
TRABD2BA6NFA1 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.55■□□□□ 0.24
TRABD2BA6NFA1 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRABD2BA6NFA1 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRABD2BA6NFA1 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRABD2BA6NFA1 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRABD2BA6NFA1 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRABD2BA6NFA1 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TRABD2BA6NFA1 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TRABD2BA6NFA1 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRABD2BA6NFA1 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.55■□□□□ 0.24
TRABD2BA6NFA1 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRABD2BA6NFA1 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRABD2BA6NFA1 TIMM8BP1-201ENST00000452384 211 ntBASIC16.55■□□□□ 0.24
TRABD2BA6NFA1 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.55■□□□□ 0.24
TRABD2BA6NFA1 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.55■□□□□ 0.24
TRABD2BA6NFA1 RN7SL204P-201ENST00000582831 262 ntBASIC16.55■□□□□ 0.24
TRABD2BA6NFA1 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.55■□□□□ 0.24
TRABD2BA6NFA1 AL353135.1-201ENST00000606729 504 ntBASIC16.55■□□□□ 0.24
TRABD2BA6NFA1 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRABD2BA6NFA1 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.55■□□□□ 0.24
TRABD2BA6NFA1 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
TRABD2BA6NFA1 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TRABD2BA6NFA1 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms