Protein–RNA interactions for Protein: A6NCL2

LRCOL1, Leucine-rich colipase-like protein 1, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCOL1A6NCL2 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LRCOL1A6NCL2 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
LRCOL1A6NCL2 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LRCOL1A6NCL2 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC11.6□□□□□ -0.55
LRCOL1A6NCL2 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
LRCOL1A6NCL2 AC138028.4-201ENST00000564984 1845 ntBASIC11.6□□□□□ -0.55
LRCOL1A6NCL2 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LRCOL1A6NCL2 PC-208ENST00000529047 1607 ntTSL 3 BASIC11.6□□□□□ -0.55
LRCOL1A6NCL2 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LRCOL1A6NCL2 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC11.6□□□□□ -0.55
LRCOL1A6NCL2 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
LRCOL1A6NCL2 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LRCOL1A6NCL2 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LRCOL1A6NCL2 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LRCOL1A6NCL2 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 AC126755.1-201ENST00000525846 6405 ntBASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 ABALON-201ENST00000629058 1903 ntBASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 AC132938.5-201ENST00000624980 1813 ntBASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 NKTR-203ENST00000442970 646 ntTSL 2 BASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 BX005266.1-201ENST00000473402 457 ntBASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 MSRA-206ENST00000521209 814 ntTSL 3 BASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 RNF151-202ENST00000569210 853 ntTSL 2 BASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 AC116407.3-201ENST00000623905 1129 ntBASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 AC107918.4-202ENST00000641623 219 ntBASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
LRCOL1A6NCL2 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
LRCOL1A6NCL2 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
LRCOL1A6NCL2 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
LRCOL1A6NCL2 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
LRCOL1A6NCL2 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC11.58□□□□□ -0.55
LRCOL1A6NCL2 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
LRCOL1A6NCL2 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
LRCOL1A6NCL2 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
LRCOL1A6NCL2 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
LRCOL1A6NCL2 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
LRCOL1A6NCL2 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LRCOL1A6NCL2 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LRCOL1A6NCL2 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LRCOL1A6NCL2 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC11.58□□□□□ -0.56
LRCOL1A6NCL2 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LRCOL1A6NCL2 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LRCOL1A6NCL2 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LRCOL1A6NCL2 HLA-J-201ENST00000462773 1622 ntBASIC11.58□□□□□ -0.56
LRCOL1A6NCL2 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
LRCOL1A6NCL2 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC11.58□□□□□ -0.56
LRCOL1A6NCL2 AC139713.2-201ENST00000641328 2723 ntBASIC11.58□□□□□ -0.56
LRCOL1A6NCL2 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LRCOL1A6NCL2 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
LRCOL1A6NCL2 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LRCOL1A6NCL2 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
LRCOL1A6NCL2 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
LRCOL1A6NCL2 AL020989.1-201ENST00000422979 469 ntBASIC11.58□□□□□ -0.56
LRCOL1A6NCL2 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC11.58□□□□□ -0.56
LRCOL1A6NCL2 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC11.58□□□□□ -0.56
LRCOL1A6NCL2 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC11.58□□□□□ -0.56
LRCOL1A6NCL2 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC11.58□□□□□ -0.56
LRCOL1A6NCL2 SLC25A1P1-201ENST00000528351 927 ntBASIC11.58□□□□□ -0.56
LRCOL1A6NCL2 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC11.58□□□□□ -0.56
LRCOL1A6NCL2 AC012640.2-201ENST00000561606 901 ntBASIC11.58□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms