Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
UBE2D4Q9Y2X8 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
UBE2D4Q9Y2X8 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC12.06□□□□□ -0.48
UBE2D4Q9Y2X8 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC12.06□□□□□ -0.48
UBE2D4Q9Y2X8 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
UBE2D4Q9Y2X8 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
UBE2D4Q9Y2X8 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
UBE2D4Q9Y2X8 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
UBE2D4Q9Y2X8 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
UBE2D4Q9Y2X8 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
UBE2D4Q9Y2X8 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
UBE2D4Q9Y2X8 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC12.06□□□□□ -0.48
UBE2D4Q9Y2X8 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
UBE2D4Q9Y2X8 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
UBE2D4Q9Y2X8 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
UBE2D4Q9Y2X8 AL513477.1-201ENST00000602865 2407 ntBASIC12.06□□□□□ -0.48
UBE2D4Q9Y2X8 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC12.06□□□□□ -0.48
UBE2D4Q9Y2X8 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
UBE2D4Q9Y2X8 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC12.06□□□□□ -0.48
UBE2D4Q9Y2X8 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 FLJ16779-201ENST00000612722 7638 ntBASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 MMP23A-201ENST00000234610 1017 ntBASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 AC068472.1-201ENST00000474589 881 ntBASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 IGHV3-52-201ENST00000519770 353 ntBASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 LITAF-220ENST00000620789 692 ntTSL 5 BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 CLN6-221ENST00000637494 765 ntTSL 5 BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 GCK-209ENST00000616242 2260 ntTSL 5 BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 CYP2T1P-202ENST00000641596 2535 ntBASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 AC097374.2-201ENST00000618617 1306 ntBASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
UBE2D4Q9Y2X8 AC008894.3-201ENST00000624324 3103 ntBASIC12.04□□□□□ -0.48
UBE2D4Q9Y2X8 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
UBE2D4Q9Y2X8 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
UBE2D4Q9Y2X8 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
UBE2D4Q9Y2X8 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
UBE2D4Q9Y2X8 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC12.04□□□□□ -0.48
UBE2D4Q9Y2X8 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC12.04□□□□□ -0.48
UBE2D4Q9Y2X8 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms