Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRFN1Q9P244 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRFN1Q9P244 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
LRFN1Q9P244 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.86■□□□□ 0.13
LRFN1Q9P244 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRFN1Q9P244 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
LRFN1Q9P244 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LRFN1Q9P244 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.86■□□□□ 0.13
LRFN1Q9P244 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
LRFN1Q9P244 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRFN1Q9P244 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRFN1Q9P244 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRFN1Q9P244 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
LRFN1Q9P244 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.86■□□□□ 0.13
LRFN1Q9P244 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
LRFN1Q9P244 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRFN1Q9P244 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRFN1Q9P244 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRFN1Q9P244 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRFN1Q9P244 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRFN1Q9P244 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRFN1Q9P244 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.86■□□□□ 0.13
LRFN1Q9P244 UPF3AP3-201ENST00000420996 769 ntBASIC15.86■□□□□ 0.13
LRFN1Q9P244 SLC25A6P5-201ENST00000435663 894 ntBASIC15.86■□□□□ 0.13
LRFN1Q9P244 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LRFN1Q9P244 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.86■□□□□ 0.13
LRFN1Q9P244 AC010327.4-202ENST00000591484 748 ntBASIC15.86■□□□□ 0.13
LRFN1Q9P244 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRFN1Q9P244 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.86■□□□□ 0.13
LRFN1Q9P244 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.86■□□□□ 0.13
LRFN1Q9P244 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRFN1Q9P244 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRFN1Q9P244 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LRFN1Q9P244 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LRFN1Q9P244 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRFN1Q9P244 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
LRFN1Q9P244 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
LRFN1Q9P244 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
LRFN1Q9P244 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
LRFN1Q9P244 FZD10-202ENST00000539839 3282 ntBASIC15.86■□□□□ 0.13
LRFN1Q9P244 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRFN1Q9P244 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.86■□□□□ 0.13
LRFN1Q9P244 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRFN1Q9P244 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.85■□□□□ 0.13
LRFN1Q9P244 PI4KAP1-204ENST00000612579 1703 ntBASIC15.85■□□□□ 0.13
LRFN1Q9P244 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRFN1Q9P244 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRFN1Q9P244 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRFN1Q9P244 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LRFN1Q9P244 AC006116.8-202ENST00000587620 1550 ntBASIC15.85■□□□□ 0.13
LRFN1Q9P244 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.85■□□□□ 0.13
LRFN1Q9P244 AC004832.2-201ENST00000426397 482 ntBASIC15.85■□□□□ 0.13
LRFN1Q9P244 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.85■□□□□ 0.13
LRFN1Q9P244 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRFN1Q9P244 KRT18P2-201ENST00000447938 1258 ntBASIC15.85■□□□□ 0.13
LRFN1Q9P244 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.85■□□□□ 0.13
LRFN1Q9P244 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.85■□□□□ 0.13
LRFN1Q9P244 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.85■□□□□ 0.13
LRFN1Q9P244 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
LRFN1Q9P244 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.85■□□□□ 0.13
LRFN1Q9P244 AC010654.1-201ENST00000615722 808 ntBASIC15.85■□□□□ 0.13
LRFN1Q9P244 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRFN1Q9P244 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LRFN1Q9P244 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.85■□□□□ 0.13
LRFN1Q9P244 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.85■□□□□ 0.13
LRFN1Q9P244 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRFN1Q9P244 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRFN1Q9P244 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LRFN1Q9P244 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRFN1Q9P244 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
LRFN1Q9P244 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LRFN1Q9P244 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRFN1Q9P244 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRFN1Q9P244 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRFN1Q9P244 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
LRFN1Q9P244 LINC00304-203ENST00000565008 1864 ntBASIC15.84■□□□□ 0.13
LRFN1Q9P244 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRFN1Q9P244 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
LRFN1Q9P244 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRFN1Q9P244 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRFN1Q9P244 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
LRFN1Q9P244 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRFN1Q9P244 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
LRFN1Q9P244 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.84■□□□□ 0.13
LRFN1Q9P244 GPX1P2-201ENST00000429271 606 ntBASIC15.84■□□□□ 0.13
LRFN1Q9P244 HCG4B-203ENST00000450128 991 ntBASIC15.84■□□□□ 0.13
LRFN1Q9P244 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.84■□□□□ 0.13
LRFN1Q9P244 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.84■□□□□ 0.13
LRFN1Q9P244 MTDHP5-201ENST00000598980 586 ntBASIC15.84■□□□□ 0.13
LRFN1Q9P244 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.84■□□□□ 0.13
LRFN1Q9P244 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRFN1Q9P244 AL590787.1-201ENST00000568856 1315 ntBASIC15.84■□□□□ 0.13
LRFN1Q9P244 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRFN1Q9P244 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRFN1Q9P244 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRFN1Q9P244 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.84■□□□□ 0.13
LRFN1Q9P244 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRFN1Q9P244 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRFN1Q9P244 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.84■□□□□ 0.13
LRFN1Q9P244 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms