Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.4■□□□□ 0.7
COL20A1Q9P218 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
COL20A1Q9P218 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.4■□□□□ 0.7
COL20A1Q9P218 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.4■□□□□ 0.7
COL20A1Q9P218 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.4■□□□□ 0.7
COL20A1Q9P218 DUX4L17-201ENST00000557360 1267 ntBASIC19.4■□□□□ 0.7
COL20A1Q9P218 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL20A1Q9P218 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.4■□□□□ 0.7
COL20A1Q9P218 AC079781.4-201ENST00000641908 219 ntBASIC19.4■□□□□ 0.7
COL20A1Q9P218 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL20A1Q9P218 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
COL20A1Q9P218 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL20A1Q9P218 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL20A1Q9P218 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL20A1Q9P218 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL20A1Q9P218 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL20A1Q9P218 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL20A1Q9P218 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL20A1Q9P218 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL20A1Q9P218 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL20A1Q9P218 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.39■□□□□ 0.7
COL20A1Q9P218 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
COL20A1Q9P218 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
COL20A1Q9P218 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL20A1Q9P218 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL20A1Q9P218 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.39■□□□□ 0.69
COL20A1Q9P218 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL20A1Q9P218 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
COL20A1Q9P218 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL20A1Q9P218 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL20A1Q9P218 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL20A1Q9P218 AC254562.1-201ENST00000417586 456 ntBASIC19.39■□□□□ 0.69
COL20A1Q9P218 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.39■□□□□ 0.69
COL20A1Q9P218 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL20A1Q9P218 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.39■□□□□ 0.69
COL20A1Q9P218 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.39■□□□□ 0.69
COL20A1Q9P218 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL20A1Q9P218 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL20A1Q9P218 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
COL20A1Q9P218 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL20A1Q9P218 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
COL20A1Q9P218 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.39■□□□□ 0.69
COL20A1Q9P218 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL20A1Q9P218 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
COL20A1Q9P218 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL20A1Q9P218 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.39■□□□□ 0.69
COL20A1Q9P218 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL20A1Q9P218 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL20A1Q9P218 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL20A1Q9P218 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL20A1Q9P218 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL20A1Q9P218 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
COL20A1Q9P218 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL20A1Q9P218 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
COL20A1Q9P218 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.38■□□□□ 0.69
COL20A1Q9P218 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL20A1Q9P218 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.38■□□□□ 0.69
COL20A1Q9P218 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
COL20A1Q9P218 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL20A1Q9P218 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.38■□□□□ 0.69
COL20A1Q9P218 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.38■□□□□ 0.69
COL20A1Q9P218 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
COL20A1Q9P218 PMS2P2-201ENST00000425039 1128 ntBASIC19.38■□□□□ 0.69
COL20A1Q9P218 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
COL20A1Q9P218 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.38■□□□□ 0.69
COL20A1Q9P218 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.38■□□□□ 0.69
COL20A1Q9P218 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
COL20A1Q9P218 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.38■□□□□ 0.69
COL20A1Q9P218 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL20A1Q9P218 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.38■□□□□ 0.69
COL20A1Q9P218 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
COL20A1Q9P218 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL20A1Q9P218 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.38■□□□□ 0.69
COL20A1Q9P218 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL20A1Q9P218 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
COL20A1Q9P218 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL20A1Q9P218 LINC00896-202ENST00000609602 2128 ntBASIC19.37■□□□□ 0.69
COL20A1Q9P218 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL20A1Q9P218 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
COL20A1Q9P218 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL20A1Q9P218 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL20A1Q9P218 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL20A1Q9P218 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL20A1Q9P218 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL20A1Q9P218 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL20A1Q9P218 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL20A1Q9P218 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
COL20A1Q9P218 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
COL20A1Q9P218 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL20A1Q9P218 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.37■□□□□ 0.69
COL20A1Q9P218 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
COL20A1Q9P218 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL20A1Q9P218 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
COL20A1Q9P218 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
COL20A1Q9P218 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL20A1Q9P218 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL20A1Q9P218 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL20A1Q9P218 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL20A1Q9P218 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL20A1Q9P218 CNN2P11-201ENST00000429351 262 ntBASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms