Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
ATP6V0A4Q9HBG4 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP6V0A4Q9HBG4 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.2■□□□□ 0.66
ATP6V0A4Q9HBG4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP6V0A4Q9HBG4 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP6V0A4Q9HBG4 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
ATP6V0A4Q9HBG4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP6V0A4Q9HBG4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
ATP6V0A4Q9HBG4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
ATP6V0A4Q9HBG4 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATP6V0A4Q9HBG4 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.19■□□□□ 0.66
ATP6V0A4Q9HBG4 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.19■□□□□ 0.66
ATP6V0A4Q9HBG4 AL138688.1-201ENST00000624851 1594 ntBASIC19.19■□□□□ 0.66
ATP6V0A4Q9HBG4 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP6V0A4Q9HBG4 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ATP6V0A4Q9HBG4 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.19■□□□□ 0.66
ATP6V0A4Q9HBG4 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP6V0A4Q9HBG4 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.19■□□□□ 0.66
ATP6V0A4Q9HBG4 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.19■□□□□ 0.66
ATP6V0A4Q9HBG4 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.19■□□□□ 0.66
ATP6V0A4Q9HBG4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.19■□□□□ 0.66
ATP6V0A4Q9HBG4 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP6V0A4Q9HBG4 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.19■□□□□ 0.66
ATP6V0A4Q9HBG4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP6V0A4Q9HBG4 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.19■□□□□ 0.66
ATP6V0A4Q9HBG4 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.19■□□□□ 0.66
ATP6V0A4Q9HBG4 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.19■□□□□ 0.66
ATP6V0A4Q9HBG4 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP6V0A4Q9HBG4 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
ATP6V0A4Q9HBG4 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
ATP6V0A4Q9HBG4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP6V0A4Q9HBG4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP6V0A4Q9HBG4 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.19■□□□□ 0.66
ATP6V0A4Q9HBG4 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP6V0A4Q9HBG4 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ATP6V0A4Q9HBG4 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATP6V0A4Q9HBG4 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATP6V0A4Q9HBG4 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP6V0A4Q9HBG4 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP6V0A4Q9HBG4 GPR89P-201ENST00000407924 1495 ntBASIC19.18■□□□□ 0.66
ATP6V0A4Q9HBG4 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP6V0A4Q9HBG4 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.18■□□□□ 0.66
ATP6V0A4Q9HBG4 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.18■□□□□ 0.66
ATP6V0A4Q9HBG4 RNA5SP416-201ENST00000516838 111 ntBASIC19.18■□□□□ 0.66
ATP6V0A4Q9HBG4 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.18■□□□□ 0.66
ATP6V0A4Q9HBG4 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.18■□□□□ 0.66
ATP6V0A4Q9HBG4 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATP6V0A4Q9HBG4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP6V0A4Q9HBG4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP6V0A4Q9HBG4 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.18■□□□□ 0.66
ATP6V0A4Q9HBG4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP6V0A4Q9HBG4 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP6V0A4Q9HBG4 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP6V0A4Q9HBG4 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATP6V0A4Q9HBG4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
ATP6V0A4Q9HBG4 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP6V0A4Q9HBG4 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
ATP6V0A4Q9HBG4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.18■□□□□ 0.66
ATP6V0A4Q9HBG4 AC009053.2-201ENST00000563701 2365 ntBASIC19.18■□□□□ 0.66
ATP6V0A4Q9HBG4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.17■□□□□ 0.66
ATP6V0A4Q9HBG4 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATP6V0A4Q9HBG4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATP6V0A4Q9HBG4 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATP6V0A4Q9HBG4 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
ATP6V0A4Q9HBG4 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP6V0A4Q9HBG4 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
ATP6V0A4Q9HBG4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATP6V0A4Q9HBG4 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP6V0A4Q9HBG4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP6V0A4Q9HBG4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
ATP6V0A4Q9HBG4 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.17■□□□□ 0.66
ATP6V0A4Q9HBG4 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATP6V0A4Q9HBG4 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.17■□□□□ 0.66
ATP6V0A4Q9HBG4 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.17■□□□□ 0.66
ATP6V0A4Q9HBG4 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.17■□□□□ 0.66
ATP6V0A4Q9HBG4 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATP6V0A4Q9HBG4 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP6V0A4Q9HBG4 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.17■□□□□ 0.66
ATP6V0A4Q9HBG4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.17■□□□□ 0.66
ATP6V0A4Q9HBG4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATP6V0A4Q9HBG4 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.17■□□□□ 0.66
ATP6V0A4Q9HBG4 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP6V0A4Q9HBG4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ATP6V0A4Q9HBG4 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP6V0A4Q9HBG4 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
ATP6V0A4Q9HBG4 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP6V0A4Q9HBG4 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
ATP6V0A4Q9HBG4 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.16■□□□□ 0.66
ATP6V0A4Q9HBG4 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP6V0A4Q9HBG4 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP6V0A4Q9HBG4 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP6V0A4Q9HBG4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ATP6V0A4Q9HBG4 AC009947.1-201ENST00000444350 727 ntBASIC19.16■□□□□ 0.66
ATP6V0A4Q9HBG4 AC040169.1-201ENST00000565382 521 ntBASIC19.16■□□□□ 0.66
ATP6V0A4Q9HBG4 AL805961.1-202ENST00000641562 540 ntBASIC19.16■□□□□ 0.66
ATP6V0A4Q9HBG4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ATP6V0A4Q9HBG4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP6V0A4Q9HBG4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ATP6V0A4Q9HBG4 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP6V0A4Q9HBG4 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms