Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM3Q9BZL3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM3Q9BZL3 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
SMIM3Q9BZL3 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC14.18□□□□□ -0.14
SMIM3Q9BZL3 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM3Q9BZL3 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM3Q9BZL3 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SMIM3Q9BZL3 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM3Q9BZL3 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM3Q9BZL3 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM3Q9BZL3 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.18□□□□□ -0.14
SMIM3Q9BZL3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM3Q9BZL3 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SMIM3Q9BZL3 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM3Q9BZL3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM3Q9BZL3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
SMIM3Q9BZL3 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM3Q9BZL3 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM3Q9BZL3 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM3Q9BZL3 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SMIM3Q9BZL3 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.17□□□□□ -0.14
SMIM3Q9BZL3 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC14.17□□□□□ -0.14
SMIM3Q9BZL3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SMIM3Q9BZL3 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.17□□□□□ -0.14
SMIM3Q9BZL3 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM3Q9BZL3 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM3Q9BZL3 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM3Q9BZL3 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM3Q9BZL3 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SMIM3Q9BZL3 AC233263.1-201ENST00000578059 224 ntBASIC14.17□□□□□ -0.14
SMIM3Q9BZL3 MIR4674-201ENST00000582457 87 ntBASIC14.17□□□□□ -0.14
SMIM3Q9BZL3 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC14.17□□□□□ -0.14
SMIM3Q9BZL3 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM3Q9BZL3 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM3Q9BZL3 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM3Q9BZL3 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.17□□□□□ -0.14
SMIM3Q9BZL3 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM3Q9BZL3 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC14.17□□□□□ -0.14
SMIM3Q9BZL3 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.17□□□□□ -0.14
SMIM3Q9BZL3 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.17□□□□□ -0.14
SMIM3Q9BZL3 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM3Q9BZL3 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.17□□□□□ -0.14
SMIM3Q9BZL3 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SMIM3Q9BZL3 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM3Q9BZL3 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM3Q9BZL3 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SMIM3Q9BZL3 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC14.17□□□□□ -0.14
SMIM3Q9BZL3 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM3Q9BZL3 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM3Q9BZL3 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SMIM3Q9BZL3 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM3Q9BZL3 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM3Q9BZL3 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.16□□□□□ -0.14
SMIM3Q9BZL3 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM3Q9BZL3 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.16□□□□□ -0.14
SMIM3Q9BZL3 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM3Q9BZL3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM3Q9BZL3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
SMIM3Q9BZL3 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM3Q9BZL3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM3Q9BZL3 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM3Q9BZL3 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC14.16□□□□□ -0.14
SMIM3Q9BZL3 DDX43P3-201ENST00000441064 443 ntBASIC14.16□□□□□ -0.14
SMIM3Q9BZL3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC14.16□□□□□ -0.14
SMIM3Q9BZL3 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC14.16□□□□□ -0.14
SMIM3Q9BZL3 AC026271.3-201ENST00000571884 352 ntBASIC14.16□□□□□ -0.14
SMIM3Q9BZL3 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SMIM3Q9BZL3 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SMIM3Q9BZL3 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM3Q9BZL3 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM3Q9BZL3 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM3Q9BZL3 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM3Q9BZL3 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
SMIM3Q9BZL3 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM3Q9BZL3 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM3Q9BZL3 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM3Q9BZL3 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM3Q9BZL3 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM3Q9BZL3 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC14.15□□□□□ -0.14
SMIM3Q9BZL3 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM3Q9BZL3 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC14.15□□□□□ -0.14
SMIM3Q9BZL3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.15□□□□□ -0.14
SMIM3Q9BZL3 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC14.15□□□□□ -0.14
SMIM3Q9BZL3 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SMIM3Q9BZL3 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC14.15□□□□□ -0.14
SMIM3Q9BZL3 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM3Q9BZL3 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM3Q9BZL3 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM3Q9BZL3 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM3Q9BZL3 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SMIM3Q9BZL3 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.15□□□□□ -0.14
SMIM3Q9BZL3 AC144831.1-201ENST00000573312 2656 ntBASIC14.15□□□□□ -0.14
SMIM3Q9BZL3 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM3Q9BZL3 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM3Q9BZL3 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM3Q9BZL3 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM3Q9BZL3 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
SMIM3Q9BZL3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC14.15□□□□□ -0.14
SMIM3Q9BZL3 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC14.15□□□□□ -0.14
SMIM3Q9BZL3 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms