Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 NDUFV2-AS1-203ENST00000608008 779 ntBASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 AC133963.1-201ENST00000504166 1679 ntBASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 LINC00304-203ENST00000565008 1864 ntBASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 REXO1L11P-201ENST00000620964 1927 ntBASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 MST1L-201ENST00000442552 2185 ntBASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHRDL1Q9BU40 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CHRDL1Q9BU40 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
CHRDL1Q9BU40 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC13.77□□□□□ -0.2
CHRDL1Q9BU40 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
CHRDL1Q9BU40 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHRDL1Q9BU40 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHRDL1Q9BU40 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CHRDL1Q9BU40 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHRDL1Q9BU40 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHRDL1Q9BU40 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHRDL1Q9BU40 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHRDL1Q9BU40 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CHRDL1Q9BU40 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHRDL1Q9BU40 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CHRDL1Q9BU40 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC13.77□□□□□ -0.21
CHRDL1Q9BU40 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHRDL1Q9BU40 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC13.77□□□□□ -0.21
CHRDL1Q9BU40 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHRDL1Q9BU40 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC13.77□□□□□ -0.21
CHRDL1Q9BU40 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CHRDL1Q9BU40 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHRDL1Q9BU40 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHRDL1Q9BU40 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC13.77□□□□□ -0.21
CHRDL1Q9BU40 TSPY22P-201ENST00000427496 604 ntBASIC13.77□□□□□ -0.21
CHRDL1Q9BU40 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
CHRDL1Q9BU40 DAP-202ENST00000432074 1048 ntTSL 2 BASIC13.77□□□□□ -0.21
CHRDL1Q9BU40 DDX43P3-201ENST00000441064 443 ntBASIC13.77□□□□□ -0.21
CHRDL1Q9BU40 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CHRDL1Q9BU40 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC13.77□□□□□ -0.21
CHRDL1Q9BU40 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CHRDL1Q9BU40 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CHRDL1Q9BU40 AL049597.2-201ENST00000565575 961 ntBASIC13.77□□□□□ -0.21
CHRDL1Q9BU40 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC13.77□□□□□ -0.21
CHRDL1Q9BU40 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC13.77□□□□□ -0.21
CHRDL1Q9BU40 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CHRDL1Q9BU40 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CHRDL1Q9BU40 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC13.77□□□□□ -0.21
CHRDL1Q9BU40 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CHRDL1Q9BU40 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
CHRDL1Q9BU40 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.77□□□□□ -0.21
CHRDL1Q9BU40 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CHRDL1Q9BU40 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHRDL1Q9BU40 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
CHRDL1Q9BU40 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 AL031133.1-201ENST00000406807 723 ntBASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 FAM210CP-201ENST00000445714 574 ntBASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms