Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LITAFQ99732 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LITAFQ99732 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LITAFQ99732 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LITAFQ99732 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LITAFQ99732 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
LITAFQ99732 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LITAFQ99732 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LITAFQ99732 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
LITAFQ99732 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LITAFQ99732 AC006970.2-201ENST00000450065 779 ntBASIC11.5□□□□□ -0.57
LITAFQ99732 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC11.5□□□□□ -0.57
LITAFQ99732 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC11.5□□□□□ -0.57
LITAFQ99732 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC11.5□□□□□ -0.57
LITAFQ99732 RNF121-214ENST00000533380 870 ntTSL 3 BASIC11.5□□□□□ -0.57
LITAFQ99732 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC11.5□□□□□ -0.57
LITAFQ99732 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC11.5□□□□□ -0.57
LITAFQ99732 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC11.5□□□□□ -0.57
LITAFQ99732 AC022517.1-201ENST00000592429 346 ntBASIC11.5□□□□□ -0.57
LITAFQ99732 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC11.5□□□□□ -0.57
LITAFQ99732 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC11.5□□□□□ -0.57
LITAFQ99732 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
LITAFQ99732 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC11.5□□□□□ -0.57
LITAFQ99732 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LITAFQ99732 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LITAFQ99732 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LITAFQ99732 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
LITAFQ99732 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
LITAFQ99732 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC11.5□□□□□ -0.57
LITAFQ99732 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LITAFQ99732 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LITAFQ99732 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LITAFQ99732 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LITAFQ99732 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LITAFQ99732 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC11.5□□□□□ -0.57
LITAFQ99732 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LITAFQ99732 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC11.5□□□□□ -0.57
LITAFQ99732 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LITAFQ99732 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
LITAFQ99732 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
LITAFQ99732 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LITAFQ99732 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LITAFQ99732 STK24-203ENST00000397517 4578 ntTSL 2 BASIC11.5□□□□□ -0.57
LITAFQ99732 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LITAFQ99732 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC11.5□□□□□ -0.57
LITAFQ99732 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LITAFQ99732 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LITAFQ99732 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LITAFQ99732 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC11.49□□□□□ -0.57
LITAFQ99732 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
LITAFQ99732 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
LITAFQ99732 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LITAFQ99732 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LITAFQ99732 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
LITAFQ99732 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LITAFQ99732 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC11.49□□□□□ -0.57
LITAFQ99732 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LITAFQ99732 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LITAFQ99732 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LITAFQ99732 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LITAFQ99732 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
LITAFQ99732 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC11.49□□□□□ -0.57
LITAFQ99732 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC11.49□□□□□ -0.57
LITAFQ99732 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC11.49□□□□□ -0.57
LITAFQ99732 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC11.49□□□□□ -0.57
LITAFQ99732 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LITAFQ99732 AP002490.2-201ENST00000524791 560 ntBASIC11.49□□□□□ -0.57
LITAFQ99732 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
LITAFQ99732 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LITAFQ99732 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC11.49□□□□□ -0.57
LITAFQ99732 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC11.49□□□□□ -0.57
LITAFQ99732 AL138781.1-201ENST00000566567 1274 ntBASIC11.49□□□□□ -0.57
LITAFQ99732 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC11.49□□□□□ -0.57
LITAFQ99732 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LITAFQ99732 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC11.49□□□□□ -0.57
LITAFQ99732 WT1-AS_3.1-201ENST00000613262 234 ntBASIC11.49□□□□□ -0.57
LITAFQ99732 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
LITAFQ99732 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC11.49□□□□□ -0.57
LITAFQ99732 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC11.49□□□□□ -0.57
LITAFQ99732 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC11.49□□□□□ -0.57
LITAFQ99732 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LITAFQ99732 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
LITAFQ99732 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
LITAFQ99732 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC11.49□□□□□ -0.57
LITAFQ99732 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC11.49□□□□□ -0.57
LITAFQ99732 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LITAFQ99732 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC11.49□□□□□ -0.57
LITAFQ99732 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC11.49□□□□□ -0.57
LITAFQ99732 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
LITAFQ99732 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
LITAFQ99732 AL596087.1-201ENST00000400979 1969 ntBASIC11.48□□□□□ -0.57
LITAFQ99732 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
LITAFQ99732 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC11.48□□□□□ -0.57
LITAFQ99732 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
LITAFQ99732 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
LITAFQ99732 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
LITAFQ99732 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC11.48□□□□□ -0.57
LITAFQ99732 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC11.48□□□□□ -0.57
LITAFQ99732 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC11.48□□□□□ -0.57
LITAFQ99732 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms