Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
FGD4Q96M96 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
FGD4Q96M96 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FGD4Q96M96 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FGD4Q96M96 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
FGD4Q96M96 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
FGD4Q96M96 LYSMD4-203ENST00000378904 2122 ntBASIC19.48■□□□□ 0.71
FGD4Q96M96 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FGD4Q96M96 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FGD4Q96M96 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FGD4Q96M96 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
FGD4Q96M96 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
FGD4Q96M96 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FGD4Q96M96 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FGD4Q96M96 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
FGD4Q96M96 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.47■□□□□ 0.71
FGD4Q96M96 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.47■□□□□ 0.71
FGD4Q96M96 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC19.47■□□□□ 0.71
FGD4Q96M96 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.47■□□□□ 0.71
FGD4Q96M96 AC109322.1-201ENST00000524499 1264 ntBASIC19.47■□□□□ 0.71
FGD4Q96M96 AC004835.2-201ENST00000603762 682 ntBASIC19.47■□□□□ 0.71
FGD4Q96M96 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
FGD4Q96M96 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
FGD4Q96M96 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FGD4Q96M96 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.47■□□□□ 0.71
FGD4Q96M96 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
FGD4Q96M96 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FGD4Q96M96 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
FGD4Q96M96 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
FGD4Q96M96 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.47■□□□□ 0.71
FGD4Q96M96 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FGD4Q96M96 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
FGD4Q96M96 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
FGD4Q96M96 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FGD4Q96M96 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FGD4Q96M96 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FGD4Q96M96 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FGD4Q96M96 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.46■□□□□ 0.71
FGD4Q96M96 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.46■□□□□ 0.71
FGD4Q96M96 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FGD4Q96M96 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
FGD4Q96M96 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.46■□□□□ 0.71
FGD4Q96M96 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.46■□□□□ 0.71
FGD4Q96M96 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.46■□□□□ 0.71
FGD4Q96M96 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.46■□□□□ 0.71
FGD4Q96M96 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.46■□□□□ 0.71
FGD4Q96M96 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
FGD4Q96M96 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
FGD4Q96M96 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
FGD4Q96M96 HLA-J-203ENST00000494367 1087 ntBASIC19.46■□□□□ 0.71
FGD4Q96M96 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.46■□□□□ 0.71
FGD4Q96M96 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
FGD4Q96M96 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.46■□□□□ 0.71
FGD4Q96M96 AC005332.8-201ENST00000622750 2735 ntBASIC19.46■□□□□ 0.71
FGD4Q96M96 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
FGD4Q96M96 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.46■□□□□ 0.71
FGD4Q96M96 AC129492.6-201ENST00000611383 1305 ntBASIC19.46■□□□□ 0.71
FGD4Q96M96 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
FGD4Q96M96 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FGD4Q96M96 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.46■□□□□ 0.71
FGD4Q96M96 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.46■□□□□ 0.71
FGD4Q96M96 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FGD4Q96M96 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FGD4Q96M96 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
FGD4Q96M96 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
FGD4Q96M96 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FGD4Q96M96 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.45■□□□□ 0.7
FGD4Q96M96 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.45■□□□□ 0.7
FGD4Q96M96 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.45■□□□□ 0.7
FGD4Q96M96 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FGD4Q96M96 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
FGD4Q96M96 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FGD4Q96M96 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.45■□□□□ 0.7
FGD4Q96M96 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.45■□□□□ 0.7
FGD4Q96M96 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.45■□□□□ 0.7
FGD4Q96M96 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
FGD4Q96M96 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.45■□□□□ 0.7
FGD4Q96M96 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.45■□□□□ 0.7
FGD4Q96M96 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.45■□□□□ 0.7
FGD4Q96M96 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.45■□□□□ 0.7
FGD4Q96M96 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.45■□□□□ 0.7
FGD4Q96M96 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FGD4Q96M96 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
FGD4Q96M96 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.45■□□□□ 0.7
FGD4Q96M96 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.45■□□□□ 0.7
FGD4Q96M96 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
FGD4Q96M96 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FGD4Q96M96 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FGD4Q96M96 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
FGD4Q96M96 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.44■□□□□ 0.7
FGD4Q96M96 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FGD4Q96M96 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FGD4Q96M96 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
FGD4Q96M96 AL354751.1-201ENST00000412768 1863 ntBASIC19.44■□□□□ 0.7
FGD4Q96M96 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.44■□□□□ 0.7
FGD4Q96M96 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.44■□□□□ 0.7
FGD4Q96M96 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.44■□□□□ 0.7
FGD4Q96M96 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
FGD4Q96M96 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
FGD4Q96M96 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms