Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC17Q96LX7 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CCDC17Q96LX7 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC17Q96LX7 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC17Q96LX7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC17Q96LX7 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC17Q96LX7 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC17Q96LX7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC17Q96LX7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC17Q96LX7 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC17Q96LX7 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC17Q96LX7 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC17Q96LX7 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CCDC17Q96LX7 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC17Q96LX7 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC17Q96LX7 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC17Q96LX7 AC005412.3-201ENST00000580309 715 ntBASIC20.03■□□□□ 0.8
CCDC17Q96LX7 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
CCDC17Q96LX7 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC17Q96LX7 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC17Q96LX7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC17Q96LX7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC17Q96LX7 AC116353.5-201ENST00000638148 1699 ntBASIC20.03■□□□□ 0.8
CCDC17Q96LX7 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC17Q96LX7 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC17Q96LX7 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC17Q96LX7 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC17Q96LX7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC17Q96LX7 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC17Q96LX7 NOC2LP2-201ENST00000407594 1944 ntBASIC20.02■□□□□ 0.8
CCDC17Q96LX7 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC17Q96LX7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CCDC17Q96LX7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC17Q96LX7 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC17Q96LX7 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC20.02■□□□□ 0.8
CCDC17Q96LX7 GGCT-205ENST00000409436 954 ntTSL 3 BASIC20.02■□□□□ 0.8
CCDC17Q96LX7 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC20.02■□□□□ 0.8
CCDC17Q96LX7 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC17Q96LX7 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC20.02■□□□□ 0.8
CCDC17Q96LX7 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC20.02■□□□□ 0.8
CCDC17Q96LX7 SNHG9-202ENST00000564014 471 ntBASIC20.02■□□□□ 0.8
CCDC17Q96LX7 MIR4515-201ENST00000584082 81 ntBASIC20.02■□□□□ 0.8
CCDC17Q96LX7 AC092902.6-201ENST00000641783 218 ntBASIC20.02■□□□□ 0.8
CCDC17Q96LX7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC17Q96LX7 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC20.02■□□□□ 0.8
CCDC17Q96LX7 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
CCDC17Q96LX7 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC17Q96LX7 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC17Q96LX7 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
CCDC17Q96LX7 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC20.02■□□□□ 0.79
CCDC17Q96LX7 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC17Q96LX7 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC17Q96LX7 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CCDC17Q96LX7 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC17Q96LX7 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC17Q96LX7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC17Q96LX7 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC20.01■□□□□ 0.79
CCDC17Q96LX7 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC17Q96LX7 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
CCDC17Q96LX7 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC17Q96LX7 PUS1-205ENST00000535067 838 ntTSL 3 BASIC20.01■□□□□ 0.79
CCDC17Q96LX7 CCND1-203ENST00000536559 553 ntTSL 3 BASIC20.01■□□□□ 0.79
CCDC17Q96LX7 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
CCDC17Q96LX7 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC17Q96LX7 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC17Q96LX7 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CCDC17Q96LX7 AL596442.2-201ENST00000610240 980 ntBASIC20.01■□□□□ 0.79
CCDC17Q96LX7 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
CCDC17Q96LX7 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC17Q96LX7 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC17Q96LX7 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC17Q96LX7 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC17Q96LX7 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
CCDC17Q96LX7 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CCDC17Q96LX7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
CCDC17Q96LX7 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20■□□□□ 0.79
CCDC17Q96LX7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC17Q96LX7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20■□□□□ 0.79
CCDC17Q96LX7 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC17Q96LX7 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC17Q96LX7 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC17Q96LX7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20■□□□□ 0.79
CCDC17Q96LX7 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC17Q96LX7 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC20■□□□□ 0.79
CCDC17Q96LX7 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC17Q96LX7 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20■□□□□ 0.79
CCDC17Q96LX7 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC17Q96LX7 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CCDC17Q96LX7 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC17Q96LX7 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC17Q96LX7 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC17Q96LX7 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC20■□□□□ 0.79
CCDC17Q96LX7 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC20■□□□□ 0.79
CCDC17Q96LX7 AC112191.1-201ENST00000523689 701 ntBASIC20■□□□□ 0.79
CCDC17Q96LX7 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC20■□□□□ 0.79
CCDC17Q96LX7 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC17Q96LX7 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
CCDC17Q96LX7 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC20■□□□□ 0.79
CCDC17Q96LX7 HARS-203ENST00000431330 1774 ntTSL 2 BASIC20■□□□□ 0.79
CCDC17Q96LX7 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms