Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SMARCD1Q96GM5 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.12■□□□□ 0.49
SMARCD1Q96GM5 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.12■□□□□ 0.49
SMARCD1Q96GM5 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMARCD1Q96GM5 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.12■□□□□ 0.49
SMARCD1Q96GM5 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMARCD1Q96GM5 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.12■□□□□ 0.49
SMARCD1Q96GM5 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMARCD1Q96GM5 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMARCD1Q96GM5 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SMARCD1Q96GM5 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SMARCD1Q96GM5 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SMARCD1Q96GM5 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMARCD1Q96GM5 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SMARCD1Q96GM5 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SMARCD1Q96GM5 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMARCD1Q96GM5 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SMARCD1Q96GM5 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMARCD1Q96GM5 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SMARCD1Q96GM5 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.11■□□□□ 0.49
SMARCD1Q96GM5 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SMARCD1Q96GM5 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.11■□□□□ 0.49
SMARCD1Q96GM5 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.11■□□□□ 0.49
SMARCD1Q96GM5 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.11■□□□□ 0.49
SMARCD1Q96GM5 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMARCD1Q96GM5 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SMARCD1Q96GM5 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
SMARCD1Q96GM5 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.11■□□□□ 0.49
SMARCD1Q96GM5 KRT18P3-201ENST00000451602 1288 ntBASIC18.11■□□□□ 0.49
SMARCD1Q96GM5 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.11■□□□□ 0.49
SMARCD1Q96GM5 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.11■□□□□ 0.49
SMARCD1Q96GM5 RNA5SP416-201ENST00000516838 111 ntBASIC18.11■□□□□ 0.49
SMARCD1Q96GM5 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.11■□□□□ 0.49
SMARCD1Q96GM5 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.11■□□□□ 0.49
SMARCD1Q96GM5 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.11■□□□□ 0.49
SMARCD1Q96GM5 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.11■□□□□ 0.49
SMARCD1Q96GM5 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.11■□□□□ 0.49
SMARCD1Q96GM5 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.11■□□□□ 0.49
SMARCD1Q96GM5 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.11■□□□□ 0.49
SMARCD1Q96GM5 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.11■□□□□ 0.49
SMARCD1Q96GM5 PP12613-201ENST00000424958 2230 ntBASIC18.11■□□□□ 0.49
SMARCD1Q96GM5 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
SMARCD1Q96GM5 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SMARCD1Q96GM5 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMARCD1Q96GM5 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.11■□□□□ 0.49
SMARCD1Q96GM5 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMARCD1Q96GM5 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMARCD1Q96GM5 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCD1Q96GM5 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SMARCD1Q96GM5 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCD1Q96GM5 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCD1Q96GM5 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCD1Q96GM5 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.1■□□□□ 0.49
SMARCD1Q96GM5 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCD1Q96GM5 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.1■□□□□ 0.49
SMARCD1Q96GM5 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCD1Q96GM5 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCD1Q96GM5 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.1■□□□□ 0.49
SMARCD1Q96GM5 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.1■□□□□ 0.49
SMARCD1Q96GM5 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCD1Q96GM5 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCD1Q96GM5 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCD1Q96GM5 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.1■□□□□ 0.49
SMARCD1Q96GM5 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.1■□□□□ 0.49
SMARCD1Q96GM5 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.1■□□□□ 0.49
SMARCD1Q96GM5 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCD1Q96GM5 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.1■□□□□ 0.49
SMARCD1Q96GM5 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.1■□□□□ 0.49
SMARCD1Q96GM5 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.1■□□□□ 0.49
SMARCD1Q96GM5 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCD1Q96GM5 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
SMARCD1Q96GM5 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCD1Q96GM5 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCD1Q96GM5 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMARCD1Q96GM5 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.09■□□□□ 0.49
SMARCD1Q96GM5 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SMARCD1Q96GM5 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SMARCD1Q96GM5 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SMARCD1Q96GM5 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.09■□□□□ 0.49
SMARCD1Q96GM5 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMARCD1Q96GM5 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.09■□□□□ 0.49
SMARCD1Q96GM5 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.09■□□□□ 0.49
SMARCD1Q96GM5 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SMARCD1Q96GM5 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.09■□□□□ 0.49
SMARCD1Q96GM5 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMARCD1Q96GM5 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SMARCD1Q96GM5 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.09■□□□□ 0.49
SMARCD1Q96GM5 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMARCD1Q96GM5 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SMARCD1Q96GM5 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
SMARCD1Q96GM5 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SMARCD1Q96GM5 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SMARCD1Q96GM5 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.09■□□□□ 0.49
SMARCD1Q96GM5 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.09■□□□□ 0.49
SMARCD1Q96GM5 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
SMARCD1Q96GM5 AC087163.2-201ENST00000457299 853 ntBASIC18.09■□□□□ 0.49
SMARCD1Q96GM5 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.09■□□□□ 0.49
SMARCD1Q96GM5 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMARCD1Q96GM5 OR7E47P-204ENST00000575924 449 ntBASIC18.09■□□□□ 0.49
SMARCD1Q96GM5 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms