Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP3S1Q92572 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP3S1Q92572 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP3S1Q92572 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
AP3S1Q92572 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
AP3S1Q92572 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP3S1Q92572 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.26■□□□□ 0.03
AP3S1Q92572 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
AP3S1Q92572 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP3S1Q92572 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP3S1Q92572 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC15.26■□□□□ 0.03
AP3S1Q92572 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC15.26■□□□□ 0.03
AP3S1Q92572 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC15.26■□□□□ 0.03
AP3S1Q92572 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.26■□□□□ 0.03
AP3S1Q92572 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.26■□□□□ 0.03
AP3S1Q92572 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
AP3S1Q92572 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP3S1Q92572 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.26■□□□□ 0.03
AP3S1Q92572 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP3S1Q92572 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP3S1Q92572 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP3S1Q92572 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
AP3S1Q92572 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
AP3S1Q92572 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.26■□□□□ 0.03
AP3S1Q92572 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
AP3S1Q92572 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
AP3S1Q92572 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP3S1Q92572 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.26■□□□□ 0.03
AP3S1Q92572 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.26■□□□□ 0.03
AP3S1Q92572 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP3S1Q92572 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP3S1Q92572 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
AP3S1Q92572 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP3S1Q92572 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP3S1Q92572 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
AP3S1Q92572 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AP3S1Q92572 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
AP3S1Q92572 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP3S1Q92572 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.25■□□□□ 0.03
AP3S1Q92572 AC104640.1-201ENST00000562617 2109 ntBASIC15.25■□□□□ 0.03
AP3S1Q92572 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP3S1Q92572 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AP3S1Q92572 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP3S1Q92572 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
AP3S1Q92572 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.25■□□□□ 0.03
AP3S1Q92572 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
AP3S1Q92572 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AP3S1Q92572 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP3S1Q92572 MFAP1P1-201ENST00000442257 1255 ntBASIC15.25■□□□□ 0.03
AP3S1Q92572 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.25■□□□□ 0.03
AP3S1Q92572 AC133681.1-201ENST00000465482 601 ntBASIC15.25■□□□□ 0.03
AP3S1Q92572 FDX2-207ENST00000494368 584 ntTSL 4 BASIC15.25■□□□□ 0.03
AP3S1Q92572 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
AP3S1Q92572 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC15.25■□□□□ 0.03
AP3S1Q92572 WWOX-216ENST00000569818 525 ntBASIC15.25■□□□□ 0.03
AP3S1Q92572 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
AP3S1Q92572 AC022517.1-201ENST00000592429 346 ntBASIC15.25■□□□□ 0.03
AP3S1Q92572 AC008403.3-201ENST00000598924 454 ntBASIC15.25■□□□□ 0.03
AP3S1Q92572 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC15.25■□□□□ 0.03
AP3S1Q92572 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC15.25■□□□□ 0.03
AP3S1Q92572 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AP3S1Q92572 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AP3S1Q92572 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP3S1Q92572 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.25■□□□□ 0.03
AP3S1Q92572 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AP3S1Q92572 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
AP3S1Q92572 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP3S1Q92572 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP3S1Q92572 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.25■□□□□ 0.03
AP3S1Q92572 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP3S1Q92572 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP3S1Q92572 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP3S1Q92572 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AP3S1Q92572 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S1Q92572 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S1Q92572 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
AP3S1Q92572 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S1Q92572 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.24■□□□□ 0.03
AP3S1Q92572 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S1Q92572 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S1Q92572 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S1Q92572 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S1Q92572 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S1Q92572 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
AP3S1Q92572 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S1Q92572 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S1Q92572 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
AP3S1Q92572 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.24■□□□□ 0.03
AP3S1Q92572 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.24■□□□□ 0.03
AP3S1Q92572 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S1Q92572 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S1Q92572 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC15.24■□□□□ 0.03
AP3S1Q92572 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S1Q92572 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S1Q92572 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S1Q92572 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC15.24■□□□□ 0.03
AP3S1Q92572 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.24■□□□□ 0.03
AP3S1Q92572 AC010240.3-201ENST00000607688 395 ntBASIC15.24■□□□□ 0.03
AP3S1Q92572 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S1Q92572 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms