Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFWD2Q8NHY2 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.12■□□□□ 0.33
RFWD2Q8NHY2 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFWD2Q8NHY2 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.12■□□□□ 0.33
RFWD2Q8NHY2 PAUPAR-201ENST00000630360 2965 ntBASIC17.12■□□□□ 0.33
RFWD2Q8NHY2 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RFWD2Q8NHY2 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFWD2Q8NHY2 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.12■□□□□ 0.33
RFWD2Q8NHY2 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RFWD2Q8NHY2 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFWD2Q8NHY2 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
RFWD2Q8NHY2 PVRIG2P-201ENST00000435460 978 ntBASIC17.12■□□□□ 0.33
RFWD2Q8NHY2 CCR12P-201ENST00000446203 998 ntBASIC17.12■□□□□ 0.33
RFWD2Q8NHY2 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.12■□□□□ 0.33
RFWD2Q8NHY2 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RFWD2Q8NHY2 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.12■□□□□ 0.33
RFWD2Q8NHY2 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.12■□□□□ 0.33
RFWD2Q8NHY2 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RFWD2Q8NHY2 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.12■□□□□ 0.33
RFWD2Q8NHY2 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.12■□□□□ 0.33
RFWD2Q8NHY2 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RFWD2Q8NHY2 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RFWD2Q8NHY2 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFWD2Q8NHY2 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.12■□□□□ 0.33
RFWD2Q8NHY2 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RFWD2Q8NHY2 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.12■□□□□ 0.33
RFWD2Q8NHY2 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RFWD2Q8NHY2 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFWD2Q8NHY2 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
RFWD2Q8NHY2 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFWD2Q8NHY2 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RFWD2Q8NHY2 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFWD2Q8NHY2 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.11■□□□□ 0.33
RFWD2Q8NHY2 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFWD2Q8NHY2 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFWD2Q8NHY2 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFWD2Q8NHY2 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFWD2Q8NHY2 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFWD2Q8NHY2 AC022188.1-201ENST00000620960 1664 ntBASIC17.11■□□□□ 0.33
RFWD2Q8NHY2 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.11■□□□□ 0.33
RFWD2Q8NHY2 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFWD2Q8NHY2 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFWD2Q8NHY2 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
RFWD2Q8NHY2 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFWD2Q8NHY2 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.11■□□□□ 0.33
RFWD2Q8NHY2 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.11■□□□□ 0.33
RFWD2Q8NHY2 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
RFWD2Q8NHY2 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.11■□□□□ 0.33
RFWD2Q8NHY2 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFWD2Q8NHY2 NAPSB-206ENST00000562112 1266 ntBASIC17.11■□□□□ 0.33
RFWD2Q8NHY2 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFWD2Q8NHY2 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.11■□□□□ 0.33
RFWD2Q8NHY2 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.11■□□□□ 0.33
RFWD2Q8NHY2 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFWD2Q8NHY2 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFWD2Q8NHY2 PKD1P5-201ENST00000532415 10291 ntBASIC17.11■□□□□ 0.33
RFWD2Q8NHY2 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFWD2Q8NHY2 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFWD2Q8NHY2 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFWD2Q8NHY2 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RFWD2Q8NHY2 CYP2D8P-201ENST00000433633 1490 ntBASIC17.11■□□□□ 0.33
RFWD2Q8NHY2 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RFWD2Q8NHY2 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.1■□□□□ 0.33
RFWD2Q8NHY2 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFWD2Q8NHY2 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RFWD2Q8NHY2 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RFWD2Q8NHY2 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFWD2Q8NHY2 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFWD2Q8NHY2 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.1■□□□□ 0.33
RFWD2Q8NHY2 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RFWD2Q8NHY2 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RFWD2Q8NHY2 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RFWD2Q8NHY2 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RFWD2Q8NHY2 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFWD2Q8NHY2 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.1■□□□□ 0.33
RFWD2Q8NHY2 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RFWD2Q8NHY2 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFWD2Q8NHY2 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFWD2Q8NHY2 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFWD2Q8NHY2 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFWD2Q8NHY2 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFWD2Q8NHY2 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.1■□□□□ 0.33
RFWD2Q8NHY2 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.1■□□□□ 0.33
RFWD2Q8NHY2 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RFWD2Q8NHY2 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.1■□□□□ 0.33
RFWD2Q8NHY2 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.1■□□□□ 0.33
RFWD2Q8NHY2 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
RFWD2Q8NHY2 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.1■□□□□ 0.33
RFWD2Q8NHY2 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFWD2Q8NHY2 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.1■□□□□ 0.33
RFWD2Q8NHY2 AC116562.4-202ENST00000641738 218 ntBASIC17.1■□□□□ 0.33
RFWD2Q8NHY2 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RFWD2Q8NHY2 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFWD2Q8NHY2 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
RFWD2Q8NHY2 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RFWD2Q8NHY2 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.1■□□□□ 0.33
RFWD2Q8NHY2 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RFWD2Q8NHY2 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.1■□□□□ 0.33
RFWD2Q8NHY2 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFWD2Q8NHY2 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms