Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
LINC00311Q8N616 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00311Q8N616 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00311Q8N616 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00311Q8N616 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00311Q8N616 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00311Q8N616 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00311Q8N616 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00311Q8N616 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00311Q8N616 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00311Q8N616 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00311Q8N616 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
LINC00311Q8N616 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00311Q8N616 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00311Q8N616 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC00311Q8N616 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00311Q8N616 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC13.98□□□□□ -0.17
LINC00311Q8N616 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
LINC00311Q8N616 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC00311Q8N616 MTDHP4-201ENST00000600287 670 ntBASIC13.98□□□□□ -0.17
LINC00311Q8N616 AC064862.7-201ENST00000604520 867 ntBASIC13.98□□□□□ -0.17
LINC00311Q8N616 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC13.98□□□□□ -0.17
LINC00311Q8N616 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00311Q8N616 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
LINC00311Q8N616 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00311Q8N616 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00311Q8N616 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00311Q8N616 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC13.98□□□□□ -0.17
LINC00311Q8N616 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00311Q8N616 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00311Q8N616 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
LINC00311Q8N616 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC13.97□□□□□ -0.17
LINC00311Q8N616 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00311Q8N616 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00311Q8N616 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00311Q8N616 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
LINC00311Q8N616 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00311Q8N616 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
LINC00311Q8N616 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC13.97□□□□□ -0.17
LINC00311Q8N616 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00311Q8N616 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00311Q8N616 HIST2H3DP1-201ENST00000401004 416 ntBASIC13.97□□□□□ -0.17
LINC00311Q8N616 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00311Q8N616 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC13.97□□□□□ -0.17
LINC00311Q8N616 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.97□□□□□ -0.17
LINC00311Q8N616 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00311Q8N616 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00311Q8N616 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13.97□□□□□ -0.17
LINC00311Q8N616 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
LINC00311Q8N616 RNF151-202ENST00000569210 853 ntTSL 2 BASIC13.97□□□□□ -0.17
LINC00311Q8N616 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.97□□□□□ -0.17
LINC00311Q8N616 AC004706.3-202ENST00000621574 984 ntBASIC13.97□□□□□ -0.17
LINC00311Q8N616 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00311Q8N616 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00311Q8N616 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC13.97□□□□□ -0.17
LINC00311Q8N616 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00311Q8N616 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00311Q8N616 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00311Q8N616 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC13.97□□□□□ -0.17
LINC00311Q8N616 AD000864.1-201ENST00000624076 2295 ntBASIC13.97□□□□□ -0.17
LINC00311Q8N616 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00311Q8N616 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00311Q8N616 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC13.96□□□□□ -0.17
LINC00311Q8N616 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00311Q8N616 AC080080.1-201ENST00000625121 2420 ntBASIC13.96□□□□□ -0.17
LINC00311Q8N616 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00311Q8N616 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00311Q8N616 TUBB8P12-201ENST00000308911 1335 ntBASIC13.96□□□□□ -0.17
LINC00311Q8N616 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
LINC00311Q8N616 TUBB7P-202ENST00000428444 1305 ntBASIC13.96□□□□□ -0.17
LINC00311Q8N616 TUBB8P7-204ENST00000567960 1332 ntBASIC13.96□□□□□ -0.17
LINC00311Q8N616 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00311Q8N616 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
LINC00311Q8N616 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC13.96□□□□□ -0.17
LINC00311Q8N616 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC13.96□□□□□ -0.17
LINC00311Q8N616 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00311Q8N616 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
LINC00311Q8N616 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC13.96□□□□□ -0.17
LINC00311Q8N616 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC13.96□□□□□ -0.17
LINC00311Q8N616 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00311Q8N616 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.96□□□□□ -0.17
LINC00311Q8N616 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00311Q8N616 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC13.96□□□□□ -0.17
LINC00311Q8N616 LAGE3P1-201ENST00000425356 484 ntBASIC13.96□□□□□ -0.17
LINC00311Q8N616 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC13.96□□□□□ -0.17
LINC00311Q8N616 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
LINC00311Q8N616 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC13.96□□□□□ -0.17
LINC00311Q8N616 AC021087.4-201ENST00000563761 564 ntBASIC13.96□□□□□ -0.17
LINC00311Q8N616 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00311Q8N616 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
LINC00311Q8N616 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00311Q8N616 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC13.96□□□□□ -0.17
LINC00311Q8N616 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
LINC00311Q8N616 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.18
LINC00311Q8N616 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC13.96□□□□□ -0.18
LINC00311Q8N616 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC00311Q8N616 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00311Q8N616 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00311Q8N616 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC00311Q8N616 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms