Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CDKL3Q8IVW4 AC091076.1-201ENST00000610741 619 ntBASIC17.76■□□□□ 0.43
CDKL3Q8IVW4 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.76■□□□□ 0.43
CDKL3Q8IVW4 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.76■□□□□ 0.43
CDKL3Q8IVW4 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CDKL3Q8IVW4 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDKL3Q8IVW4 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CDKL3Q8IVW4 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDKL3Q8IVW4 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CDKL3Q8IVW4 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDKL3Q8IVW4 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
CDKL3Q8IVW4 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.76■□□□□ 0.43
CDKL3Q8IVW4 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.76■□□□□ 0.43
CDKL3Q8IVW4 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDKL3Q8IVW4 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
CDKL3Q8IVW4 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDKL3Q8IVW4 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDKL3Q8IVW4 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDKL3Q8IVW4 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CDKL3Q8IVW4 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDKL3Q8IVW4 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDKL3Q8IVW4 PMPCAP1-201ENST00000508114 1576 ntBASIC17.75■□□□□ 0.43
CDKL3Q8IVW4 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDKL3Q8IVW4 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDKL3Q8IVW4 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.75■□□□□ 0.43
CDKL3Q8IVW4 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDKL3Q8IVW4 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.75■□□□□ 0.43
CDKL3Q8IVW4 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.75■□□□□ 0.43
CDKL3Q8IVW4 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.75■□□□□ 0.43
CDKL3Q8IVW4 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.75■□□□□ 0.43
CDKL3Q8IVW4 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDKL3Q8IVW4 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.75■□□□□ 0.43
CDKL3Q8IVW4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.75■□□□□ 0.43
CDKL3Q8IVW4 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.75■□□□□ 0.43
CDKL3Q8IVW4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDKL3Q8IVW4 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.75■□□□□ 0.43
CDKL3Q8IVW4 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CDKL3Q8IVW4 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CDKL3Q8IVW4 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CDKL3Q8IVW4 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CDKL3Q8IVW4 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDKL3Q8IVW4 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
CDKL3Q8IVW4 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDKL3Q8IVW4 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.74■□□□□ 0.43
CDKL3Q8IVW4 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDKL3Q8IVW4 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDKL3Q8IVW4 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDKL3Q8IVW4 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDKL3Q8IVW4 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
CDKL3Q8IVW4 AC106886.4-201ENST00000623557 2502 ntBASIC17.74■□□□□ 0.43
CDKL3Q8IVW4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDKL3Q8IVW4 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDKL3Q8IVW4 AC005915.1-201ENST00000624912 2018 ntBASIC17.74■□□□□ 0.43
CDKL3Q8IVW4 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CDKL3Q8IVW4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.74■□□□□ 0.43
CDKL3Q8IVW4 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.74■□□□□ 0.43
CDKL3Q8IVW4 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
CDKL3Q8IVW4 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDKL3Q8IVW4 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
CDKL3Q8IVW4 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDKL3Q8IVW4 ATP5G2P1-201ENST00000433580 426 ntBASIC17.74■□□□□ 0.43
CDKL3Q8IVW4 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
CDKL3Q8IVW4 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.74■□□□□ 0.43
CDKL3Q8IVW4 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CDKL3Q8IVW4 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.74■□□□□ 0.43
CDKL3Q8IVW4 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.74■□□□□ 0.43
CDKL3Q8IVW4 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDKL3Q8IVW4 AC099336.1-202ENST00000602961 463 ntBASIC17.74■□□□□ 0.43
CDKL3Q8IVW4 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDKL3Q8IVW4 AC092119.3-201ENST00000612618 583 ntBASIC17.74■□□□□ 0.43
CDKL3Q8IVW4 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.74■□□□□ 0.43
CDKL3Q8IVW4 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.74■□□□□ 0.43
CDKL3Q8IVW4 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDKL3Q8IVW4 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDKL3Q8IVW4 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDKL3Q8IVW4 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDKL3Q8IVW4 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CDKL3Q8IVW4 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDKL3Q8IVW4 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.74■□□□□ 0.43
CDKL3Q8IVW4 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.74■□□□□ 0.43
CDKL3Q8IVW4 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CDKL3Q8IVW4 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDKL3Q8IVW4 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.74■□□□□ 0.43
CDKL3Q8IVW4 AC105020.1-201ENST00000435356 2205 ntBASIC17.74■□□□□ 0.43
CDKL3Q8IVW4 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDKL3Q8IVW4 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDKL3Q8IVW4 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.73■□□□□ 0.43
CDKL3Q8IVW4 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDKL3Q8IVW4 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
CDKL3Q8IVW4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.73■□□□□ 0.43
CDKL3Q8IVW4 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.73■□□□□ 0.43
CDKL3Q8IVW4 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
CDKL3Q8IVW4 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.73■□□□□ 0.43
CDKL3Q8IVW4 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDKL3Q8IVW4 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CDKL3Q8IVW4 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDKL3Q8IVW4 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CDKL3Q8IVW4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDKL3Q8IVW4 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDKL3Q8IVW4 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms