Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 AL121956.5-201ENST00000625261 221 ntBASIC16■□□□□ 0.15
TUBA1AQ71U36 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TUBA1AQ71U36 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TUBA1AQ71U36 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TUBA1AQ71U36 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16■□□□□ 0.15
TUBA1AQ71U36 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
TUBA1AQ71U36 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16■□□□□ 0.15
TUBA1AQ71U36 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16■□□□□ 0.15
TUBA1AQ71U36 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TUBA1AQ71U36 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16■□□□□ 0.15
TUBA1AQ71U36 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TUBA1AQ71U36 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
TUBA1AQ71U36 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16■□□□□ 0.15
TUBA1AQ71U36 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TUBA1AQ71U36 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.99■□□□□ 0.15
TUBA1AQ71U36 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TUBA1AQ71U36 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.99■□□□□ 0.15
TUBA1AQ71U36 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TUBA1AQ71U36 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TUBA1AQ71U36 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.99■□□□□ 0.15
TUBA1AQ71U36 AC005332.1-201ENST00000577698 1310 ntBASIC15.99■□□□□ 0.15
TUBA1AQ71U36 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.99■□□□□ 0.15
TUBA1AQ71U36 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TUBA1AQ71U36 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TUBA1AQ71U36 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.99■□□□□ 0.15
TUBA1AQ71U36 PCED1CP-201ENST00000419887 785 ntBASIC15.99■□□□□ 0.15
TUBA1AQ71U36 AL645929.1-201ENST00000420084 975 ntBASIC15.99■□□□□ 0.15
TUBA1AQ71U36 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.99■□□□□ 0.15
TUBA1AQ71U36 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.99■□□□□ 0.15
TUBA1AQ71U36 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.99■□□□□ 0.15
TUBA1AQ71U36 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.99■□□□□ 0.15
TUBA1AQ71U36 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.99■□□□□ 0.15
TUBA1AQ71U36 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.99■□□□□ 0.15
TUBA1AQ71U36 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.99■□□□□ 0.15
TUBA1AQ71U36 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC15.99■□□□□ 0.15
TUBA1AQ71U36 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.99■□□□□ 0.15
TUBA1AQ71U36 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.99■□□□□ 0.15
TUBA1AQ71U36 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
TUBA1AQ71U36 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TUBA1AQ71U36 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TUBA1AQ71U36 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TUBA1AQ71U36 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TUBA1AQ71U36 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.99■□□□□ 0.15
TUBA1AQ71U36 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TUBA1AQ71U36 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TUBA1AQ71U36 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.99■□□□□ 0.15
TUBA1AQ71U36 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TUBA1AQ71U36 LINC00304-203ENST00000565008 1864 ntBASIC15.99■□□□□ 0.15
TUBA1AQ71U36 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TUBA1AQ71U36 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TUBA1AQ71U36 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TUBA1AQ71U36 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.99■□□□□ 0.15
TUBA1AQ71U36 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TUBA1AQ71U36 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TUBA1AQ71U36 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TUBA1AQ71U36 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.99■□□□□ 0.15
TUBA1AQ71U36 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TUBA1AQ71U36 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TUBA1AQ71U36 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TUBA1AQ71U36 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
TUBA1AQ71U36 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.98■□□□□ 0.15
TUBA1AQ71U36 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TUBA1AQ71U36 AC008741.2-201ENST00000612792 3115 ntBASIC15.98■□□□□ 0.15
TUBA1AQ71U36 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TUBA1AQ71U36 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TUBA1AQ71U36 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TUBA1AQ71U36 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TUBA1AQ71U36 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TUBA1AQ71U36 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TUBA1AQ71U36 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.98■□□□□ 0.15
TUBA1AQ71U36 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.98■□□□□ 0.15
TUBA1AQ71U36 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.98■□□□□ 0.15
TUBA1AQ71U36 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.98■□□□□ 0.15
TUBA1AQ71U36 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.98■□□□□ 0.15
TUBA1AQ71U36 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.98■□□□□ 0.15
TUBA1AQ71U36 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.98■□□□□ 0.15
TUBA1AQ71U36 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TUBA1AQ71U36 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.98■□□□□ 0.15
TUBA1AQ71U36 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
TUBA1AQ71U36 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TUBA1AQ71U36 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TUBA1AQ71U36 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TUBA1AQ71U36 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TUBA1AQ71U36 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TUBA1AQ71U36 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.98■□□□□ 0.15
TUBA1AQ71U36 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TUBA1AQ71U36 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TUBA1AQ71U36 AC022188.1-201ENST00000620960 1664 ntBASIC15.98■□□□□ 0.15
TUBA1AQ71U36 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TUBA1AQ71U36 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.98■□□□□ 0.15
TUBA1AQ71U36 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TUBA1AQ71U36 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TUBA1AQ71U36 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TUBA1AQ71U36 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TUBA1AQ71U36 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TUBA1AQ71U36 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.98■□□□□ 0.15
TUBA1AQ71U36 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TUBA1AQ71U36 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TUBA1AQ71U36 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TUBA1AQ71U36 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms