Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATL3Q6DD88 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATL3Q6DD88 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATL3Q6DD88 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATL3Q6DD88 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATL3Q6DD88 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.7■□□□□ 0.74
ATL3Q6DD88 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATL3Q6DD88 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
ATL3Q6DD88 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.7■□□□□ 0.74
ATL3Q6DD88 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATL3Q6DD88 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.7■□□□□ 0.74
ATL3Q6DD88 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.7■□□□□ 0.74
ATL3Q6DD88 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATL3Q6DD88 Z69720.1-201ENST00000601483 472 ntBASIC19.7■□□□□ 0.74
ATL3Q6DD88 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.7■□□□□ 0.74
ATL3Q6DD88 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATL3Q6DD88 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATL3Q6DD88 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATL3Q6DD88 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATL3Q6DD88 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATL3Q6DD88 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATL3Q6DD88 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATL3Q6DD88 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ATL3Q6DD88 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATL3Q6DD88 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.7■□□□□ 0.74
ATL3Q6DD88 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.7■□□□□ 0.74
ATL3Q6DD88 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATL3Q6DD88 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.7■□□□□ 0.74
ATL3Q6DD88 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATL3Q6DD88 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATL3Q6DD88 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATL3Q6DD88 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ATL3Q6DD88 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATL3Q6DD88 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATL3Q6DD88 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATL3Q6DD88 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATL3Q6DD88 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.69■□□□□ 0.74
ATL3Q6DD88 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATL3Q6DD88 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATL3Q6DD88 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATL3Q6DD88 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.69■□□□□ 0.74
ATL3Q6DD88 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATL3Q6DD88 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATL3Q6DD88 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATL3Q6DD88 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.69■□□□□ 0.74
ATL3Q6DD88 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.69■□□□□ 0.74
ATL3Q6DD88 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.69■□□□□ 0.74
ATL3Q6DD88 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATL3Q6DD88 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.69■□□□□ 0.74
ATL3Q6DD88 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.69■□□□□ 0.74
ATL3Q6DD88 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.69■□□□□ 0.74
ATL3Q6DD88 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.69■□□□□ 0.74
ATL3Q6DD88 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.69■□□□□ 0.74
ATL3Q6DD88 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATL3Q6DD88 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
ATL3Q6DD88 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATL3Q6DD88 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.69■□□□□ 0.74
ATL3Q6DD88 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.69■□□□□ 0.74
ATL3Q6DD88 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATL3Q6DD88 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATL3Q6DD88 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ATL3Q6DD88 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATL3Q6DD88 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATL3Q6DD88 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATL3Q6DD88 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
ATL3Q6DD88 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
ATL3Q6DD88 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.68■□□□□ 0.74
ATL3Q6DD88 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.68■□□□□ 0.74
ATL3Q6DD88 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATL3Q6DD88 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATL3Q6DD88 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.68■□□□□ 0.74
ATL3Q6DD88 SIGLEC30P-201ENST00000455569 941 ntBASIC19.68■□□□□ 0.74
ATL3Q6DD88 FAM86EP-206ENST00000510506 987 ntBASIC19.68■□□□□ 0.74
ATL3Q6DD88 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.68■□□□□ 0.74
ATL3Q6DD88 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.68■□□□□ 0.74
ATL3Q6DD88 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
ATL3Q6DD88 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.68■□□□□ 0.74
ATL3Q6DD88 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.68■□□□□ 0.74
ATL3Q6DD88 AC116407.4-201ENST00000623319 1061 ntBASIC19.68■□□□□ 0.74
ATL3Q6DD88 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
ATL3Q6DD88 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATL3Q6DD88 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATL3Q6DD88 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
ATL3Q6DD88 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATL3Q6DD88 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATL3Q6DD88 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATL3Q6DD88 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATL3Q6DD88 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.68■□□□□ 0.74
ATL3Q6DD88 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.68■□□□□ 0.74
ATL3Q6DD88 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATL3Q6DD88 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATL3Q6DD88 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
ATL3Q6DD88 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATL3Q6DD88 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
ATL3Q6DD88 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATL3Q6DD88 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATL3Q6DD88 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.67■□□□□ 0.74
ATL3Q6DD88 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.67■□□□□ 0.74
ATL3Q6DD88 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATL3Q6DD88 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms