Protein–RNA interactions for Protein: P84022

SMAD3, Mothers against decapentaplegic homolog 3, humanhuman

Known RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3P84022 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SMAD3P84022 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMAD3P84022 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMAD3P84022 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMAD3P84022 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SMAD3P84022 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMAD3P84022 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMAD3P84022 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SMAD3P84022 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.52■□□□□ 0.56
SMAD3P84022 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.52■□□□□ 0.56
SMAD3P84022 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SMAD3P84022 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
SMAD3P84022 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.52■□□□□ 0.56
SMAD3P84022 RPS2P32-201ENST00000439199 892 ntBASIC18.52■□□□□ 0.56
SMAD3P84022 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.52■□□□□ 0.56
SMAD3P84022 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC18.52■□□□□ 0.56
SMAD3P84022 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC18.52■□□□□ 0.56
SMAD3P84022 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC18.52■□□□□ 0.56
SMAD3P84022 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.52■□□□□ 0.56
SMAD3P84022 HILS1-202ENST00000545329 423 ntBASIC18.52■□□□□ 0.56
SMAD3P84022 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMAD3P84022 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMAD3P84022 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMAD3P84022 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMAD3P84022 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SMAD3P84022 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.52■□□□□ 0.55
SMAD3P84022 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.52■□□□□ 0.55
SMAD3P84022 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
SMAD3P84022 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SMAD3P84022 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SMAD3P84022 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMAD3P84022 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SMAD3P84022 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMAD3P84022 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMAD3P84022 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SMAD3P84022 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMAD3P84022 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMAD3P84022 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMAD3P84022 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.51■□□□□ 0.55
SMAD3P84022 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SMAD3P84022 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.51■□□□□ 0.55
SMAD3P84022 HCG11-201ENST00000411553 5696 ntBASIC18.51■□□□□ 0.55
SMAD3P84022 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
SMAD3P84022 SPTLC1P1-201ENST00000447199 261 ntBASIC18.51■□□□□ 0.55
SMAD3P84022 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.51■□□□□ 0.55
SMAD3P84022 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.51■□□□□ 0.55
SMAD3P84022 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC18.51■□□□□ 0.55
SMAD3P84022 AC017083.2-201ENST00000608069 979 ntBASIC18.51■□□□□ 0.55
SMAD3P84022 BCL2-203ENST00000589955 5011 ntBASIC18.51■□□□□ 0.55
SMAD3P84022 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMAD3P84022 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.51■□□□□ 0.55
SMAD3P84022 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMAD3P84022 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SMAD3P84022 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMAD3P84022 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.51■□□□□ 0.55
SMAD3P84022 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SMAD3P84022 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMAD3P84022 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SMAD3P84022 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SMAD3P84022 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.51■□□□□ 0.55
SMAD3P84022 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.51■□□□□ 0.55
SMAD3P84022 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.51■□□□□ 0.55
SMAD3P84022 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMAD3P84022 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SMAD3P84022 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMAD3P84022 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.5■□□□□ 0.55
SMAD3P84022 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
SMAD3P84022 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMAD3P84022 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMAD3P84022 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SMAD3P84022 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMAD3P84022 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.5■□□□□ 0.55
SMAD3P84022 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMAD3P84022 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.5■□□□□ 0.55
SMAD3P84022 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMAD3P84022 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMAD3P84022 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.5■□□□□ 0.55
SMAD3P84022 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.5■□□□□ 0.55
SMAD3P84022 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC18.5■□□□□ 0.55
SMAD3P84022 SLC25A6P2-201ENST00000497974 877 ntBASIC18.5■□□□□ 0.55
SMAD3P84022 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC18.5■□□□□ 0.55
SMAD3P84022 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.5■□□□□ 0.55
SMAD3P84022 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.5■□□□□ 0.55
SMAD3P84022 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.5■□□□□ 0.55
SMAD3P84022 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.5■□□□□ 0.55
SMAD3P84022 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.5■□□□□ 0.55
SMAD3P84022 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SMAD3P84022 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMAD3P84022 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.5■□□□□ 0.55
SMAD3P84022 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SMAD3P84022 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SMAD3P84022 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMAD3P84022 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMAD3P84022 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMAD3P84022 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.5■□□□□ 0.55
SMAD3P84022 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.5■□□□□ 0.55
SMAD3P84022 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.49■□□□□ 0.55
SMAD3P84022 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SMAD3P84022 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SMAD3P84022 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms