Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC14.98□□□□□ -0.01
HCFC1P51610 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HCFC1P51610 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HCFC1P51610 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC14.98□□□□□ -0.01
HCFC1P51610 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC14.98□□□□□ -0.01
HCFC1P51610 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HCFC1P51610 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC14.98□□□□□ -0.01
HCFC1P51610 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HCFC1P51610 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
HCFC1P51610 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HCFC1P51610 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HCFC1P51610 AC020763.4-201ENST00000623414 4170 ntBASIC14.98□□□□□ -0.01
HCFC1P51610 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HCFC1P51610 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HCFC1P51610 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HCFC1P51610 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.98□□□□□ -0.01
HCFC1P51610 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HCFC1P51610 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.98□□□□□ -0.01
HCFC1P51610 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.98□□□□□ -0.01
HCFC1P51610 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.98□□□□□ -0.01
HCFC1P51610 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.98□□□□□ -0.01
HCFC1P51610 DUX4L17-201ENST00000557360 1267 ntBASIC14.98□□□□□ -0.01
HCFC1P51610 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HCFC1P51610 AKAP8P1-201ENST00000434743 1349 ntBASIC14.98□□□□□ -0.01
HCFC1P51610 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HCFC1P51610 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HCFC1P51610 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC14.98□□□□□ -0.01
HCFC1P51610 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HCFC1P51610 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HCFC1P51610 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HCFC1P51610 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC14.97□□□□□ -0.01
HCFC1P51610 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HCFC1P51610 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HCFC1P51610 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.97□□□□□ -0.01
HCFC1P51610 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.97□□□□□ -0.01
HCFC1P51610 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.97□□□□□ -0.01
HCFC1P51610 MNT-208ENST00000575394 606 ntTSL 4 BASIC14.97□□□□□ -0.01
HCFC1P51610 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.97□□□□□ -0.01
HCFC1P51610 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.97□□□□□ -0.01
HCFC1P51610 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.97□□□□□ -0.01
HCFC1P51610 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HCFC1P51610 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HCFC1P51610 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HCFC1P51610 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.97□□□□□ -0.01
HCFC1P51610 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.97□□□□□ -0.01
HCFC1P51610 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HCFC1P51610 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HCFC1P51610 AC138028.4-201ENST00000564984 1845 ntBASIC14.97□□□□□ -0.01
HCFC1P51610 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HCFC1P51610 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HCFC1P51610 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HCFC1P51610 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HCFC1P51610 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC14.97□□□□□ -0.01
HCFC1P51610 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HCFC1P51610 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HCFC1P51610 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HCFC1P51610 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.97□□□□□ -0.01
HCFC1P51610 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.97□□□□□ -0.01
HCFC1P51610 AC107918.2-201ENST00000530817 355 ntBASIC14.97□□□□□ -0.01
HCFC1P51610 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.97□□□□□ -0.01
HCFC1P51610 AL390955.2-201ENST00000603032 514 ntBASIC14.97□□□□□ -0.01
HCFC1P51610 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.97□□□□□ -0.01
HCFC1P51610 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HCFC1P51610 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
HCFC1P51610 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
HCFC1P51610 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC14.97□□□□□ -0.01
HCFC1P51610 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.97□□□□□ -0.01
HCFC1P51610 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC14.96□□□□□ -0.01
HCFC1P51610 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HCFC1P51610 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HCFC1P51610 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HCFC1P51610 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.96□□□□□ -0.01
HCFC1P51610 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HCFC1P51610 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
HCFC1P51610 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HCFC1P51610 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HCFC1P51610 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HCFC1P51610 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HCFC1P51610 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.96□□□□□ -0.01
HCFC1P51610 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HCFC1P51610 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HCFC1P51610 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.96□□□□□ -0.01
HCFC1P51610 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HCFC1P51610 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HCFC1P51610 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
HCFC1P51610 PMS2P4-201ENST00000412466 1052 ntBASIC14.96□□□□□ -0.01
HCFC1P51610 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.96□□□□□ -0.01
HCFC1P51610 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HCFC1P51610 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.96□□□□□ -0.01
HCFC1P51610 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
HCFC1P51610 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.96□□□□□ -0.01
HCFC1P51610 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.96□□□□□ -0.01
HCFC1P51610 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HCFC1P51610 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC14.96□□□□□ -0.01
HCFC1P51610 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.96□□□□□ -0.01
HCFC1P51610 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
HCFC1P51610 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HCFC1P51610 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC14.96□□□□□ -0.01
HCFC1P51610 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HCFC1P51610 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms