Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 PRR29-204ENST00000577953 565 ntTSL 4 BASIC30.45■■■□□ 2.47
SMARCA4P51532 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC30.45■■■□□ 2.47
SMARCA4P51532 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
SMARCA4P51532 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
SMARCA4P51532 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC30.44■■■□□ 2.46
SMARCA4P51532 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC30.44■■■□□ 2.46
SMARCA4P51532 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
SMARCA4P51532 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC30.44■■■□□ 2.46
SMARCA4P51532 RNA5-8SN1-201ENST00000610460 153 ntBASIC30.44■■■□□ 2.46
SMARCA4P51532 RNA5-8SN5-202ENST00000612463 153 ntBASIC30.44■■■□□ 2.46
SMARCA4P51532 RNA5-8SN4-201ENST00000613359 153 ntBASIC30.44■■■□□ 2.46
SMARCA4P51532 RNA5-8SN5-201ENST00000619471 153 ntBASIC30.44■■■□□ 2.46
SMARCA4P51532 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
SMARCA4P51532 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC30.44■■■□□ 2.46
SMARCA4P51532 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC30.44■■■□□ 2.46
SMARCA4P51532 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
SMARCA4P51532 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
SMARCA4P51532 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
SMARCA4P51532 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
SMARCA4P51532 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC30.44■■■□□ 2.46
SMARCA4P51532 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
SMARCA4P51532 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC30.44■■■□□ 2.46
SMARCA4P51532 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
SMARCA4P51532 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC30.44■■■□□ 2.46
SMARCA4P51532 FAM220BP-201ENST00000377689 816 ntBASIC30.44■■■□□ 2.46
SMARCA4P51532 ZNF890P-202ENST00000530367 1156 ntBASIC30.44■■■□□ 2.46
SMARCA4P51532 RAB34-223ENST00000636154 730 ntTSL 2 BASIC30.44■■■□□ 2.46
SMARCA4P51532 AC131009.4-201ENST00000624048 1740 ntBASIC30.43■■■□□ 2.46
SMARCA4P51532 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC30.43■■■□□ 2.46
SMARCA4P51532 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC30.43■■■□□ 2.46
SMARCA4P51532 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC30.43■■■□□ 2.46
SMARCA4P51532 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC30.43■■■□□ 2.46
SMARCA4P51532 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
SMARCA4P51532 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC30.43■■■□□ 2.46
SMARCA4P51532 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
SMARCA4P51532 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
SMARCA4P51532 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
SMARCA4P51532 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC30.43■■■□□ 2.46
SMARCA4P51532 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC30.43■■■□□ 2.46
SMARCA4P51532 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC30.43■■■□□ 2.46
SMARCA4P51532 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC30.43■■■□□ 2.46
SMARCA4P51532 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC30.43■■■□□ 2.46
SMARCA4P51532 GIMAP3P-201ENST00000495150 836 ntBASIC30.43■■■□□ 2.46
SMARCA4P51532 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC30.43■■■□□ 2.46
SMARCA4P51532 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC30.43■■■□□ 2.46
SMARCA4P51532 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC30.43■■■□□ 2.46
SMARCA4P51532 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC30.43■■■□□ 2.46
SMARCA4P51532 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC30.43■■■□□ 2.46
SMARCA4P51532 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC30.42■■■□□ 2.46
SMARCA4P51532 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC30.42■■■□□ 2.46
SMARCA4P51532 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
SMARCA4P51532 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
SMARCA4P51532 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC30.42■■■□□ 2.46
SMARCA4P51532 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
SMARCA4P51532 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
SMARCA4P51532 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
SMARCA4P51532 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC30.42■■■□□ 2.46
SMARCA4P51532 SSH2-210ENST00000582084 560 ntTSL 3 BASIC30.42■■■□□ 2.46
SMARCA4P51532 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC30.42■■■□□ 2.46
SMARCA4P51532 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC30.42■■■□□ 2.46
SMARCA4P51532 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC30.42■■■□□ 2.46
SMARCA4P51532 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
SMARCA4P51532 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC30.42■■■□□ 2.46
SMARCA4P51532 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC30.41■■■□□ 2.46
SMARCA4P51532 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
SMARCA4P51532 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
SMARCA4P51532 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC30.41■■■□□ 2.46
SMARCA4P51532 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
SMARCA4P51532 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
SMARCA4P51532 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC30.41■■■□□ 2.46
SMARCA4P51532 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC30.41■■■□□ 2.46
SMARCA4P51532 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC30.41■■■□□ 2.46
SMARCA4P51532 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC30.41■■■□□ 2.46
SMARCA4P51532 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC30.41■■■□□ 2.46
SMARCA4P51532 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC30.41■■■□□ 2.46
SMARCA4P51532 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC30.41■■■□□ 2.46
SMARCA4P51532 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
SMARCA4P51532 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC30.41■■■□□ 2.46
SMARCA4P51532 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
SMARCA4P51532 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
SMARCA4P51532 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC30.41■■■□□ 2.46
SMARCA4P51532 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SMARCA4P51532 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SMARCA4P51532 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC30.4■■■□□ 2.46
SMARCA4P51532 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC30.4■■■□□ 2.46
SMARCA4P51532 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC30.4■■■□□ 2.46
SMARCA4P51532 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC30.4■■■□□ 2.46
SMARCA4P51532 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
SMARCA4P51532 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC30.4■■■□□ 2.46
SMARCA4P51532 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC30.4■■■□□ 2.46
SMARCA4P51532 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC30.4■■■□□ 2.46
SMARCA4P51532 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
SMARCA4P51532 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC30.4■■■□□ 2.46
SMARCA4P51532 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
SMARCA4P51532 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC30.4■■■□□ 2.46
SMARCA4P51532 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC30.4■■■□□ 2.46
SMARCA4P51532 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC30.4■■■□□ 2.46
SMARCA4P51532 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC30.4■■■□□ 2.46
SMARCA4P51532 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
SMARCA4P51532 MIR1909-201ENST00000411312 80 ntBASIC30.4■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms