Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
ATP6V1AP38606 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ATP6V1AP38606 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
ATP6V1AP38606 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
ATP6V1AP38606 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC21.84■■□□□ 1.09
ATP6V1AP38606 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
ATP6V1AP38606 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
ATP6V1AP38606 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC21.84■■□□□ 1.09
ATP6V1AP38606 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ATP6V1AP38606 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ATP6V1AP38606 GK-202ENST00000378941 458 ntTSL 3 BASIC21.84■■□□□ 1.09
ATP6V1AP38606 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ATP6V1AP38606 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
ATP6V1AP38606 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
ATP6V1AP38606 HLA-J-202ENST00000469281 1241 ntBASIC21.84■■□□□ 1.09
ATP6V1AP38606 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC21.84■■□□□ 1.09
ATP6V1AP38606 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC21.84■■□□□ 1.09
ATP6V1AP38606 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC21.84■■□□□ 1.09
ATP6V1AP38606 AL158211.3-201ENST00000607385 239 ntBASIC21.84■■□□□ 1.09
ATP6V1AP38606 HFE2-206ENST00000634927 506 ntTSL 4 BASIC21.84■■□□□ 1.09
ATP6V1AP38606 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
ATP6V1AP38606 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
ATP6V1AP38606 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ATP6V1AP38606 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
ATP6V1AP38606 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.84■■□□□ 1.09
ATP6V1AP38606 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
ATP6V1AP38606 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.84■■□□□ 1.09
ATP6V1AP38606 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
ATP6V1AP38606 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
ATP6V1AP38606 MADD-208ENST00000405573 1823 ntTSL 5 BASIC21.83■■□□□ 1.09
ATP6V1AP38606 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
ATP6V1AP38606 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
ATP6V1AP38606 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
ATP6V1AP38606 HLA-DQB1-201ENST00000374943 1656 ntBASIC21.83■■□□□ 1.09
ATP6V1AP38606 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
ATP6V1AP38606 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
ATP6V1AP38606 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
ATP6V1AP38606 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
ATP6V1AP38606 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC21.83■■□□□ 1.09
ATP6V1AP38606 PPP6R2P1-201ENST00000450880 1275 ntBASIC21.83■■□□□ 1.09
ATP6V1AP38606 AL512638.1-201ENST00000457493 794 ntBASIC21.83■■□□□ 1.09
ATP6V1AP38606 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC21.83■■□□□ 1.09
ATP6V1AP38606 GATD1-206ENST00000526325 756 ntTSL 5 BASIC21.83■■□□□ 1.09
ATP6V1AP38606 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
ATP6V1AP38606 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC21.83■■□□□ 1.09
ATP6V1AP38606 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
ATP6V1AP38606 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC21.83■■□□□ 1.09
ATP6V1AP38606 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC21.83■■□□□ 1.09
ATP6V1AP38606 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
ATP6V1AP38606 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
ATP6V1AP38606 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.83■■□□□ 1.09
ATP6V1AP38606 GNAS-203ENST00000306120 1878 ntBASIC21.83■■□□□ 1.08
ATP6V1AP38606 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
ATP6V1AP38606 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC21.83■■□□□ 1.08
ATP6V1AP38606 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
ATP6V1AP38606 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.83■■□□□ 1.08
ATP6V1AP38606 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.83■■□□□ 1.08
ATP6V1AP38606 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
ATP6V1AP38606 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.83■■□□□ 1.08
ATP6V1AP38606 AC138028.4-201ENST00000564984 1845 ntBASIC21.83■■□□□ 1.08
ATP6V1AP38606 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ATP6V1AP38606 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ATP6V1AP38606 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ATP6V1AP38606 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
ATP6V1AP38606 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
ATP6V1AP38606 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ATP6V1AP38606 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
ATP6V1AP38606 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ATP6V1AP38606 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC21.82■■□□□ 1.08
ATP6V1AP38606 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
ATP6V1AP38606 AC069120.2-201ENST00000524091 540 ntBASIC21.82■■□□□ 1.08
ATP6V1AP38606 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC21.82■■□□□ 1.08
ATP6V1AP38606 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ATP6V1AP38606 MIR6080-201ENST00000617359 66 ntBASIC21.82■■□□□ 1.08
ATP6V1AP38606 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC21.82■■□□□ 1.08
ATP6V1AP38606 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ATP6V1AP38606 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ATP6V1AP38606 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC21.82■■□□□ 1.08
ATP6V1AP38606 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC21.82■■□□□ 1.08
ATP6V1AP38606 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ATP6V1AP38606 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ATP6V1AP38606 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
ATP6V1AP38606 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ATP6V1AP38606 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
ATP6V1AP38606 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
ATP6V1AP38606 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
ATP6V1AP38606 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ATP6V1AP38606 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
ATP6V1AP38606 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC21.81■■□□□ 1.08
ATP6V1AP38606 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ATP6V1AP38606 GAPDHP21-201ENST00000450301 1010 ntBASIC21.81■■□□□ 1.08
ATP6V1AP38606 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC21.81■■□□□ 1.08
ATP6V1AP38606 AC109635.5-201ENST00000533593 962 ntBASIC21.81■■□□□ 1.08
ATP6V1AP38606 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ATP6V1AP38606 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC21.81■■□□□ 1.08
ATP6V1AP38606 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ATP6V1AP38606 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.81■■□□□ 1.08
ATP6V1AP38606 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ATP6V1AP38606 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ATP6V1AP38606 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms