Protein–RNA interactions for Protein: P25440

BRD2, Bromodomain-containing protein 2, humanhuman

Known RBP Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD2P25440 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BRD2P25440 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BRD2P25440 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
BRD2P25440 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC18.59■□□□□ 0.57
BRD2P25440 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
BRD2P25440 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BRD2P25440 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
BRD2P25440 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
BRD2P25440 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
BRD2P25440 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BRD2P25440 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
BRD2P25440 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BRD2P25440 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC18.59■□□□□ 0.57
BRD2P25440 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BRD2P25440 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BRD2P25440 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.58■□□□□ 0.57
BRD2P25440 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
BRD2P25440 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
BRD2P25440 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
BRD2P25440 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.58■□□□□ 0.57
BRD2P25440 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
BRD2P25440 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.58■□□□□ 0.57
BRD2P25440 AC046185.3-201ENST00000623228 1824 ntBASIC18.58■□□□□ 0.57
BRD2P25440 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
BRD2P25440 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
BRD2P25440 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
BRD2P25440 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.58■□□□□ 0.57
BRD2P25440 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
BRD2P25440 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.58■□□□□ 0.56
BRD2P25440 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.58■□□□□ 0.56
BRD2P25440 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
BRD2P25440 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.58■□□□□ 0.56
BRD2P25440 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.58■□□□□ 0.56
BRD2P25440 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
BRD2P25440 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.58■□□□□ 0.56
BRD2P25440 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.58■□□□□ 0.56
BRD2P25440 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.58■□□□□ 0.56
BRD2P25440 AC091304.2-201ENST00000564639 760 ntBASIC18.58■□□□□ 0.56
BRD2P25440 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.58■□□□□ 0.56
BRD2P25440 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
BRD2P25440 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
BRD2P25440 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
BRD2P25440 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
BRD2P25440 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
BRD2P25440 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
BRD2P25440 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.58■□□□□ 0.56
BRD2P25440 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
BRD2P25440 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
BRD2P25440 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
BRD2P25440 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
BRD2P25440 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.58■□□□□ 0.56
BRD2P25440 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.58■□□□□ 0.56
BRD2P25440 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
BRD2P25440 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.57■□□□□ 0.56
BRD2P25440 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
BRD2P25440 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.57■□□□□ 0.56
BRD2P25440 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRD2P25440 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BRD2P25440 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRD2P25440 AL023806.1-201ENST00000603994 1649 ntBASIC18.57■□□□□ 0.56
BRD2P25440 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRD2P25440 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BRD2P25440 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRD2P25440 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRD2P25440 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRD2P25440 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BRD2P25440 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.57■□□□□ 0.56
BRD2P25440 DUSP5P1-201ENST00000441325 1139 ntBASIC18.57■□□□□ 0.56
BRD2P25440 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.57■□□□□ 0.56
BRD2P25440 STK19B-204ENST00000512515 211 ntBASIC18.57■□□□□ 0.56
BRD2P25440 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.57■□□□□ 0.56
BRD2P25440 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.57■□□□□ 0.56
BRD2P25440 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BRD2P25440 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.57■□□□□ 0.56
BRD2P25440 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRD2P25440 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BRD2P25440 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
BRD2P25440 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRD2P25440 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRD2P25440 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.57■□□□□ 0.56
BRD2P25440 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.57■□□□□ 0.56
BRD2P25440 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BRD2P25440 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BRD2P25440 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRD2P25440 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
BRD2P25440 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRD2P25440 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRD2P25440 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRD2P25440 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRD2P25440 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
BRD2P25440 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRD2P25440 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
BRD2P25440 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRD2P25440 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRD2P25440 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
BRD2P25440 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
BRD2P25440 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRD2P25440 AC009336.1-201ENST00000608941 1553 ntBASIC18.56■□□□□ 0.56
BRD2P25440 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRD2P25440 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms