Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 AC012640.2-201ENST00000561606 901 ntBASIC17.45■□□□□ 0.38
XPAP23025 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.45■□□□□ 0.38
XPAP23025 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
XPAP23025 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.45■□□□□ 0.38
XPAP23025 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
XPAP23025 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.45■□□□□ 0.38
XPAP23025 PGM5P2-202ENST00000637225 1043 ntBASIC17.45■□□□□ 0.38
XPAP23025 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.45■□□□□ 0.38
XPAP23025 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
XPAP23025 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
XPAP23025 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.45■□□□□ 0.38
XPAP23025 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
XPAP23025 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.45■□□□□ 0.38
XPAP23025 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
XPAP23025 AP002414.3-201ENST00000589352 1468 ntBASIC17.44■□□□□ 0.38
XPAP23025 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
XPAP23025 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
XPAP23025 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
XPAP23025 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.44■□□□□ 0.38
XPAP23025 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
XPAP23025 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
XPAP23025 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.44■□□□□ 0.38
XPAP23025 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.44■□□□□ 0.38
XPAP23025 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
XPAP23025 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.44■□□□□ 0.38
XPAP23025 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.44■□□□□ 0.38
XPAP23025 LINC00982-205ENST00000420957 435 ntBASIC17.44■□□□□ 0.38
XPAP23025 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.44■□□□□ 0.38
XPAP23025 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.44■□□□□ 0.38
XPAP23025 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
XPAP23025 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
XPAP23025 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.44■□□□□ 0.38
XPAP23025 AL356488.2-201ENST00000602755 427 ntBASIC17.44■□□□□ 0.38
XPAP23025 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.44■□□□□ 0.38
XPAP23025 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
XPAP23025 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
XPAP23025 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
XPAP23025 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
XPAP23025 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
XPAP23025 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
XPAP23025 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
XPAP23025 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
XPAP23025 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
XPAP23025 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.44■□□□□ 0.38
XPAP23025 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
XPAP23025 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
XPAP23025 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
XPAP23025 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
XPAP23025 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
XPAP23025 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.44■□□□□ 0.38
XPAP23025 LYSMD4-203ENST00000378904 2122 ntBASIC17.44■□□□□ 0.38
XPAP23025 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
XPAP23025 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
XPAP23025 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
XPAP23025 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.43■□□□□ 0.38
XPAP23025 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
XPAP23025 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
XPAP23025 ZNF259P1-201ENST00000407656 1365 ntBASIC17.43■□□□□ 0.38
XPAP23025 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
XPAP23025 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
XPAP23025 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
XPAP23025 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.43■□□□□ 0.38
XPAP23025 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.43■□□□□ 0.38
XPAP23025 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.43■□□□□ 0.38
XPAP23025 RPL13AP23-201ENST00000480739 586 ntBASIC17.43■□□□□ 0.38
XPAP23025 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.43■□□□□ 0.38
XPAP23025 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
XPAP23025 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.43■□□□□ 0.38
XPAP23025 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
XPAP23025 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.43■□□□□ 0.38
XPAP23025 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.43■□□□□ 0.38
XPAP23025 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.43■□□□□ 0.38
XPAP23025 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.43■□□□□ 0.38
XPAP23025 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.43■□□□□ 0.38
XPAP23025 AL139424.1-201ENST00000607572 797 ntBASIC17.43■□□□□ 0.38
XPAP23025 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.43■□□□□ 0.38
XPAP23025 AC004706.3-202ENST00000621574 984 ntBASIC17.43■□□□□ 0.38
XPAP23025 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.43■□□□□ 0.38
XPAP23025 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.43■□□□□ 0.38
XPAP23025 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
XPAP23025 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
XPAP23025 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
XPAP23025 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
XPAP23025 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
XPAP23025 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
XPAP23025 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
XPAP23025 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
XPAP23025 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.42■□□□□ 0.38
XPAP23025 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
XPAP23025 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
XPAP23025 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.42■□□□□ 0.38
XPAP23025 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.42■□□□□ 0.38
XPAP23025 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
XPAP23025 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
XPAP23025 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
XPAP23025 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.42■□□□□ 0.38
XPAP23025 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
XPAP23025 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
XPAP23025 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
XPAP23025 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms