Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC29.81■■■□□ 2.36
TOP2AP11388 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC29.81■■■□□ 2.36
TOP2AP11388 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC29.81■■■□□ 2.36
TOP2AP11388 AC063926.2-201ENST00000623766 1308 ntBASIC29.81■■■□□ 2.36
TOP2AP11388 SLC25A6P5-201ENST00000435663 894 ntBASIC29.81■■■□□ 2.36
TOP2AP11388 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC29.81■■■□□ 2.36
TOP2AP11388 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC29.81■■■□□ 2.36
TOP2AP11388 RARRES2P9-201ENST00000565168 469 ntBASIC29.81■■■□□ 2.36
TOP2AP11388 AC025048.6-201ENST00000634326 1161 ntBASIC29.81■■■□□ 2.36
TOP2AP11388 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
TOP2AP11388 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
TOP2AP11388 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
TOP2AP11388 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
TOP2AP11388 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC29.8■■■□□ 2.36
TOP2AP11388 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
TOP2AP11388 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
TOP2AP11388 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
TOP2AP11388 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC29.8■■■□□ 2.36
TOP2AP11388 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
TOP2AP11388 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC29.8■■■□□ 2.36
TOP2AP11388 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC29.8■■■□□ 2.36
TOP2AP11388 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
TOP2AP11388 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC29.8■■■□□ 2.36
TOP2AP11388 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC29.8■■■□□ 2.36
TOP2AP11388 MIR4492-201ENST00000581627 80 ntBASIC29.8■■■□□ 2.36
TOP2AP11388 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
TOP2AP11388 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
TOP2AP11388 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC29.8■■■□□ 2.36
TOP2AP11388 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC29.8■■■□□ 2.36
TOP2AP11388 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC29.8■■■□□ 2.36
TOP2AP11388 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC29.8■■■□□ 2.36
TOP2AP11388 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC29.8■■■□□ 2.36
TOP2AP11388 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC29.79■■■□□ 2.36
TOP2AP11388 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC29.79■■■□□ 2.36
TOP2AP11388 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC29.79■■■□□ 2.36
TOP2AP11388 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC29.79■■■□□ 2.36
TOP2AP11388 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC29.79■■■□□ 2.36
TOP2AP11388 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC29.79■■■□□ 2.36
TOP2AP11388 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
TOP2AP11388 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
TOP2AP11388 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC29.79■■■□□ 2.36
TOP2AP11388 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC29.79■■■□□ 2.36
TOP2AP11388 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
TOP2AP11388 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
TOP2AP11388 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC29.79■■■□□ 2.36
TOP2AP11388 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
TOP2AP11388 AC009477.1-201ENST00000452936 217 ntBASIC29.79■■■□□ 2.36
TOP2AP11388 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
TOP2AP11388 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC29.79■■■□□ 2.36
TOP2AP11388 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC29.79■■■□□ 2.36
TOP2AP11388 CYP2A7P1-201ENST00000595391 815 ntBASIC29.79■■■□□ 2.36
TOP2AP11388 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
TOP2AP11388 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
TOP2AP11388 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC29.78■■■□□ 2.36
TOP2AP11388 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
TOP2AP11388 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC29.78■■■□□ 2.36
TOP2AP11388 FOS-208ENST00000555686 1496 ntTSL 2 BASIC29.78■■■□□ 2.36
TOP2AP11388 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC29.78■■■□□ 2.36
TOP2AP11388 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
TOP2AP11388 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
TOP2AP11388 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC29.78■■■□□ 2.36
TOP2AP11388 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC29.78■■■□□ 2.36
TOP2AP11388 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC29.78■■■□□ 2.36
TOP2AP11388 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC29.78■■■□□ 2.36
TOP2AP11388 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC29.78■■■□□ 2.36
TOP2AP11388 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
TOP2AP11388 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC29.78■■■□□ 2.36
TOP2AP11388 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC29.78■■■□□ 2.36
TOP2AP11388 AL138828.2-201ENST00000615812 383 ntBASIC29.78■■■□□ 2.36
TOP2AP11388 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC29.78■■■□□ 2.36
TOP2AP11388 AC022144.1-201ENST00000602255 1580 ntBASIC29.78■■■□□ 2.36
TOP2AP11388 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC29.78■■■□□ 2.36
TOP2AP11388 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC29.77■■■□□ 2.36
TOP2AP11388 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC29.77■■■□□ 2.36
TOP2AP11388 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC29.77■■■□□ 2.36
TOP2AP11388 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
TOP2AP11388 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
TOP2AP11388 LY6E-204ENST00000519546 971 ntTSL 2 BASIC29.77■■■□□ 2.36
TOP2AP11388 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC29.77■■■□□ 2.36
TOP2AP11388 BANF1P1-201ENST00000553684 263 ntBASIC29.77■■■□□ 2.36
TOP2AP11388 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
TOP2AP11388 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
TOP2AP11388 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
TOP2AP11388 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC29.77■■■□□ 2.36
TOP2AP11388 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC29.77■■■□□ 2.36
TOP2AP11388 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
TOP2AP11388 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
TOP2AP11388 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
TOP2AP11388 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC29.76■■■□□ 2.36
TOP2AP11388 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC29.76■■■□□ 2.36
TOP2AP11388 AC007274.1-201ENST00000439805 662 ntBASIC29.76■■■□□ 2.36
TOP2AP11388 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC29.76■■■□□ 2.36
TOP2AP11388 NAA50-208ENST00000497255 789 ntTSL 5 BASIC29.76■■■□□ 2.36
TOP2AP11388 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC29.76■■■□□ 2.36
TOP2AP11388 AC009118.2-201ENST00000613275 655 ntBASIC29.76■■■□□ 2.36
TOP2AP11388 AL590560.3-201ENST00000623350 461 ntBASIC29.76■■■□□ 2.36
TOP2AP11388 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC29.76■■■□□ 2.36
TOP2AP11388 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
TOP2AP11388 AC012317.2-201ENST00000623305 2251 ntBASIC29.76■■■□□ 2.36
TOP2AP11388 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms