Protein–RNA interactions for Protein: P11229

CHRM1, Muscarinic acetylcholine receptor M1, humanhuman

Predicted RBP Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRM1P11229 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHRM1P11229 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHRM1P11229 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHRM1P11229 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CHRM1P11229 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHRM1P11229 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.2■□□□□ 0.5
CHRM1P11229 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHRM1P11229 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.2■□□□□ 0.5
CHRM1P11229 POLD2P1-201ENST00000511220 997 ntBASIC18.2■□□□□ 0.5
CHRM1P11229 PGAM5P1-201ENST00000518923 814 ntBASIC18.2■□□□□ 0.5
CHRM1P11229 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHRM1P11229 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.2■□□□□ 0.5
CHRM1P11229 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.2■□□□□ 0.5
CHRM1P11229 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.2■□□□□ 0.5
CHRM1P11229 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
CHRM1P11229 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHRM1P11229 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHRM1P11229 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHRM1P11229 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHRM1P11229 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHRM1P11229 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHRM1P11229 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHRM1P11229 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHRM1P11229 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHRM1P11229 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHRM1P11229 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CHRM1P11229 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHRM1P11229 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.19■□□□□ 0.5
CHRM1P11229 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHRM1P11229 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHRM1P11229 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHRM1P11229 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CHRM1P11229 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.19■□□□□ 0.5
CHRM1P11229 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHRM1P11229 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHRM1P11229 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.19■□□□□ 0.5
CHRM1P11229 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.19■□□□□ 0.5
CHRM1P11229 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHRM1P11229 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CHRM1P11229 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHRM1P11229 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC18.19■□□□□ 0.5
CHRM1P11229 RPS20P25-201ENST00000412447 352 ntBASIC18.19■□□□□ 0.5
CHRM1P11229 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.19■□□□□ 0.5
CHRM1P11229 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CHRM1P11229 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.19■□□□□ 0.5
CHRM1P11229 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.19■□□□□ 0.5
CHRM1P11229 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHRM1P11229 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC18.19■□□□□ 0.5
CHRM1P11229 MIR583HG-201ENST00000507997 704 ntTSL 2 BASIC18.19■□□□□ 0.5
CHRM1P11229 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHRM1P11229 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.19■□□□□ 0.5
CHRM1P11229 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CHRM1P11229 AL353708.1-201ENST00000567904 1257 ntBASIC18.19■□□□□ 0.5
CHRM1P11229 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHRM1P11229 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.19■□□□□ 0.5
CHRM1P11229 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHRM1P11229 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CHRM1P11229 AP000867.4-201ENST00000641616 219 ntBASIC18.19■□□□□ 0.5
CHRM1P11229 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHRM1P11229 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CHRM1P11229 PCDHB17P-201ENST00000539533 2393 ntBASIC18.19■□□□□ 0.5
CHRM1P11229 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC18.19■□□□□ 0.5
CHRM1P11229 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHRM1P11229 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHRM1P11229 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHRM1P11229 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHRM1P11229 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHRM1P11229 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHRM1P11229 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHRM1P11229 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHRM1P11229 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.19■□□□□ 0.5
CHRM1P11229 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.19■□□□□ 0.5
CHRM1P11229 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHRM1P11229 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHRM1P11229 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.18■□□□□ 0.5
CHRM1P11229 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHRM1P11229 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.18■□□□□ 0.5
CHRM1P11229 AC020763.4-201ENST00000623414 4170 ntBASIC18.18■□□□□ 0.5
CHRM1P11229 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CHRM1P11229 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHRM1P11229 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHRM1P11229 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHRM1P11229 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
CHRM1P11229 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHRM1P11229 RPS2P1-201ENST00000434010 821 ntBASIC18.18■□□□□ 0.5
CHRM1P11229 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.18■□□□□ 0.5
CHRM1P11229 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
CHRM1P11229 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.18■□□□□ 0.5
CHRM1P11229 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.18■□□□□ 0.5
CHRM1P11229 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.18■□□□□ 0.5
CHRM1P11229 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.18■□□□□ 0.5
CHRM1P11229 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHRM1P11229 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.18■□□□□ 0.5
CHRM1P11229 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHRM1P11229 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.18■□□□□ 0.5
CHRM1P11229 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CHRM1P11229 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHRM1P11229 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHRM1P11229 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHRM1P11229 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms