Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 LINC01451-201ENST00000623792 534 ntBASIC13.44□□□□□ -0.26
CXCL1P09341 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC13.44□□□□□ -0.26
CXCL1P09341 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC13.44□□□□□ -0.26
CXCL1P09341 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CXCL1P09341 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CXCL1P09341 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CXCL1P09341 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC13.44□□□□□ -0.26
CXCL1P09341 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CXCL1P09341 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CXCL1P09341 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CXCL1P09341 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC13.44□□□□□ -0.26
CXCL1P09341 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.44□□□□□ -0.26
CXCL1P09341 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC13.44□□□□□ -0.26
CXCL1P09341 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CXCL1P09341 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CXCL1P09341 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL1P09341 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC13.43□□□□□ -0.26
CXCL1P09341 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL1P09341 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL1P09341 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CXCL1P09341 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL1P09341 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC13.43□□□□□ -0.26
CXCL1P09341 AC009102.3-201ENST00000623118 1491 ntBASIC13.43□□□□□ -0.26
CXCL1P09341 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL1P09341 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL1P09341 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC13.43□□□□□ -0.26
CXCL1P09341 ADM-208ENST00000534464 1640 ntTSL 2 BASIC13.43□□□□□ -0.26
CXCL1P09341 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL1P09341 REXO1L11P-201ENST00000620964 1927 ntBASIC13.43□□□□□ -0.26
CXCL1P09341 AC013268.4-201ENST00000637413 2228 ntBASIC13.43□□□□□ -0.26
CXCL1P09341 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
CXCL1P09341 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL1P09341 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL1P09341 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL1P09341 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL1P09341 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
CXCL1P09341 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CXCL1P09341 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL1P09341 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.43□□□□□ -0.26
CXCL1P09341 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL1P09341 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.43□□□□□ -0.26
CXCL1P09341 ELP6-205ENST00000439305 880 ntTSL 2 BASIC13.43□□□□□ -0.26
CXCL1P09341 FAM207BP-201ENST00000447172 505 ntBASIC13.43□□□□□ -0.26
CXCL1P09341 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL1P09341 AP002982.1-201ENST00000492365 877 ntBASIC13.43□□□□□ -0.26
CXCL1P09341 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC13.43□□□□□ -0.26
CXCL1P09341 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL1P09341 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC13.43□□□□□ -0.26
CXCL1P09341 AL031985.4-201ENST00000642138 673 ntBASIC13.43□□□□□ -0.26
CXCL1P09341 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL1P09341 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL1P09341 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL1P09341 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL1P09341 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL1P09341 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC13.43□□□□□ -0.26
CXCL1P09341 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL1P09341 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL1P09341 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL1P09341 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
CXCL1P09341 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.43□□□□□ -0.26
CXCL1P09341 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.43□□□□□ -0.26
CXCL1P09341 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL1P09341 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CXCL1P09341 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL1P09341 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CXCL1P09341 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL1P09341 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CXCL1P09341 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CXCL1P09341 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.42□□□□□ -0.26
CXCL1P09341 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CXCL1P09341 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CXCL1P09341 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
CXCL1P09341 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.42□□□□□ -0.26
CXCL1P09341 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CXCL1P09341 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CXCL1P09341 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CXCL1P09341 UROS-202ENST00000368778 1556 ntTSL 2 BASIC13.42□□□□□ -0.26
CXCL1P09341 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC13.42□□□□□ -0.26
CXCL1P09341 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CXCL1P09341 KRT16P1-201ENST00000399124 1418 ntBASIC13.42□□□□□ -0.26
CXCL1P09341 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CXCL1P09341 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.42□□□□□ -0.26
CXCL1P09341 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.42□□□□□ -0.26
CXCL1P09341 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CXCL1P09341 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC13.42□□□□□ -0.26
CXCL1P09341 KIRREL3-AS3-201ENST00000404882 831 ntBASIC13.42□□□□□ -0.26
CXCL1P09341 AL023284.2-201ENST00000405850 579 ntBASIC13.42□□□□□ -0.26
CXCL1P09341 SERF2-207ENST00000409614 582 ntTSL 2 BASIC13.42□□□□□ -0.26
CXCL1P09341 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC13.42□□□□□ -0.26
CXCL1P09341 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC13.42□□□□□ -0.26
CXCL1P09341 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CXCL1P09341 AC110285.5-201ENST00000611501 352 ntBASIC13.42□□□□□ -0.26
CXCL1P09341 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CXCL1P09341 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CXCL1P09341 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC13.42□□□□□ -0.26
CXCL1P09341 SDHAP2-201ENST00000455183 2001 ntBASIC13.42□□□□□ -0.26
CXCL1P09341 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC13.42□□□□□ -0.26
CXCL1P09341 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC13.42□□□□□ -0.26
CXCL1P09341 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
CXCL1P09341 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms