Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLPTM1O96005 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLPTM1O96005 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
CLPTM1O96005 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLPTM1O96005 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.36■□□□□ 0.21
CLPTM1O96005 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLPTM1O96005 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLPTM1O96005 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLPTM1O96005 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CLPTM1O96005 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.36■□□□□ 0.21
CLPTM1O96005 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.36■□□□□ 0.21
CLPTM1O96005 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.36■□□□□ 0.21
CLPTM1O96005 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLPTM1O96005 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.36■□□□□ 0.21
CLPTM1O96005 NAPSB-206ENST00000562112 1266 ntBASIC16.36■□□□□ 0.21
CLPTM1O96005 AC010947.1-201ENST00000623454 693 ntBASIC16.36■□□□□ 0.21
CLPTM1O96005 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLPTM1O96005 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLPTM1O96005 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
CLPTM1O96005 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLPTM1O96005 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLPTM1O96005 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CLPTM1O96005 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLPTM1O96005 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLPTM1O96005 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CLPTM1O96005 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLPTM1O96005 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLPTM1O96005 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLPTM1O96005 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLPTM1O96005 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CLPTM1O96005 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLPTM1O96005 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CLPTM1O96005 GPAT2P1-201ENST00000444924 1672 ntBASIC16.36■□□□□ 0.21
CLPTM1O96005 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.36■□□□□ 0.21
CLPTM1O96005 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLPTM1O96005 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.36■□□□□ 0.21
CLPTM1O96005 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLPTM1O96005 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
CLPTM1O96005 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLPTM1O96005 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLPTM1O96005 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CLPTM1O96005 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLPTM1O96005 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLPTM1O96005 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CLPTM1O96005 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.35■□□□□ 0.21
CLPTM1O96005 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
CLPTM1O96005 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLPTM1O96005 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLPTM1O96005 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLPTM1O96005 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLPTM1O96005 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLPTM1O96005 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLPTM1O96005 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CLPTM1O96005 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLPTM1O96005 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLPTM1O96005 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.35■□□□□ 0.21
CLPTM1O96005 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.35■□□□□ 0.21
CLPTM1O96005 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLPTM1O96005 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLPTM1O96005 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLPTM1O96005 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLPTM1O96005 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.35■□□□□ 0.21
CLPTM1O96005 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.35■□□□□ 0.21
CLPTM1O96005 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.35■□□□□ 0.21
CLPTM1O96005 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.35■□□□□ 0.21
CLPTM1O96005 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CLPTM1O96005 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CLPTM1O96005 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
CLPTM1O96005 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLPTM1O96005 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.35■□□□□ 0.21
CLPTM1O96005 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLPTM1O96005 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLPTM1O96005 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLPTM1O96005 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.35■□□□□ 0.21
CLPTM1O96005 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLPTM1O96005 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLPTM1O96005 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.35■□□□□ 0.21
CLPTM1O96005 RNF216P1-203ENST00000404404 2427 ntBASIC16.35■□□□□ 0.21
CLPTM1O96005 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CLPTM1O96005 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.35■□□□□ 0.21
CLPTM1O96005 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.35■□□□□ 0.21
CLPTM1O96005 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLPTM1O96005 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.35■□□□□ 0.21
CLPTM1O96005 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLPTM1O96005 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLPTM1O96005 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLPTM1O96005 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLPTM1O96005 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLPTM1O96005 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.34■□□□□ 0.21
CLPTM1O96005 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLPTM1O96005 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLPTM1O96005 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLPTM1O96005 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLPTM1O96005 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CLPTM1O96005 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLPTM1O96005 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLPTM1O96005 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.34■□□□□ 0.21
CLPTM1O96005 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLPTM1O96005 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLPTM1O96005 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms