Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CBX6O95503 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.28■□□□□ 0.36
CBX6O95503 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.28■□□□□ 0.36
CBX6O95503 RNF216P1-203ENST00000404404 2427 ntBASIC17.28■□□□□ 0.36
CBX6O95503 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX6O95503 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CBX6O95503 AL662844.4-201ENST00000606367 2838 ntBASIC17.28■□□□□ 0.36
CBX6O95503 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX6O95503 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX6O95503 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.28■□□□□ 0.36
CBX6O95503 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
CBX6O95503 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CBX6O95503 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX6O95503 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX6O95503 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX6O95503 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CBX6O95503 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CBX6O95503 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX6O95503 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.28■□□□□ 0.36
CBX6O95503 NEK4P2-201ENST00000580004 1012 ntBASIC17.28■□□□□ 0.36
CBX6O95503 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.28■□□□□ 0.36
CBX6O95503 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.28■□□□□ 0.36
CBX6O95503 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CBX6O95503 AC007950.2-201ENST00000615045 2347 ntBASIC17.28■□□□□ 0.36
CBX6O95503 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX6O95503 LINC01311-201ENST00000565162 1445 ntBASIC17.28■□□□□ 0.36
CBX6O95503 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX6O95503 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX6O95503 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CBX6O95503 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CBX6O95503 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.28■□□□□ 0.36
CBX6O95503 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CBX6O95503 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.28■□□□□ 0.36
CBX6O95503 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CBX6O95503 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX6O95503 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CBX6O95503 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CBX6O95503 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CBX6O95503 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
CBX6O95503 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CBX6O95503 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.27■□□□□ 0.36
CBX6O95503 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.27■□□□□ 0.36
CBX6O95503 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CBX6O95503 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CBX6O95503 AC009949.1-201ENST00000623048 1830 ntBASIC17.27■□□□□ 0.36
CBX6O95503 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.27■□□□□ 0.36
CBX6O95503 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.27■□□□□ 0.36
CBX6O95503 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.27■□□□□ 0.36
CBX6O95503 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CBX6O95503 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CBX6O95503 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.27■□□□□ 0.35
CBX6O95503 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.27■□□□□ 0.35
CBX6O95503 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.27■□□□□ 0.35
CBX6O95503 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
CBX6O95503 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.35
CBX6O95503 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CBX6O95503 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.27■□□□□ 0.35
CBX6O95503 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.27■□□□□ 0.35
CBX6O95503 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CBX6O95503 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CBX6O95503 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.27■□□□□ 0.35
CBX6O95503 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.27■□□□□ 0.35
CBX6O95503 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CBX6O95503 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CBX6O95503 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CBX6O95503 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CBX6O95503 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBX6O95503 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.26■□□□□ 0.35
CBX6O95503 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBX6O95503 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBX6O95503 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CBX6O95503 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBX6O95503 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBX6O95503 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBX6O95503 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBX6O95503 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CBX6O95503 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBX6O95503 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.26■□□□□ 0.35
CBX6O95503 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBX6O95503 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CBX6O95503 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CBX6O95503 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.26■□□□□ 0.35
CBX6O95503 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.26■□□□□ 0.35
CBX6O95503 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.26■□□□□ 0.35
CBX6O95503 GCSHP2-201ENST00000560971 527 ntBASIC17.26■□□□□ 0.35
CBX6O95503 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.26■□□□□ 0.35
CBX6O95503 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.26■□□□□ 0.35
CBX6O95503 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
CBX6O95503 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBX6O95503 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBX6O95503 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBX6O95503 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.26■□□□□ 0.35
CBX6O95503 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBX6O95503 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBX6O95503 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBX6O95503 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBX6O95503 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CBX6O95503 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBX6O95503 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBX6O95503 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms