Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP2AO43633 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP2AO43633 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.44■□□□□ 0.7
CHMP2AO43633 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP2AO43633 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.44■□□□□ 0.7
CHMP2AO43633 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP2AO43633 AL138688.1-201ENST00000624851 1594 ntBASIC19.44■□□□□ 0.7
CHMP2AO43633 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP2AO43633 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP2AO43633 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.43■□□□□ 0.7
CHMP2AO43633 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP2AO43633 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.43■□□□□ 0.7
CHMP2AO43633 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
CHMP2AO43633 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP2AO43633 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
CHMP2AO43633 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP2AO43633 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP2AO43633 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP2AO43633 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP2AO43633 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP2AO43633 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.43■□□□□ 0.7
CHMP2AO43633 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.43■□□□□ 0.7
CHMP2AO43633 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.43■□□□□ 0.7
CHMP2AO43633 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.43■□□□□ 0.7
CHMP2AO43633 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP2AO43633 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP2AO43633 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP2AO43633 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.43■□□□□ 0.7
CHMP2AO43633 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP2AO43633 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP2AO43633 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP2AO43633 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.43■□□□□ 0.7
CHMP2AO43633 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.43■□□□□ 0.7
CHMP2AO43633 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
CHMP2AO43633 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP2AO43633 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP2AO43633 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
CHMP2AO43633 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP2AO43633 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.42■□□□□ 0.7
CHMP2AO43633 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP2AO43633 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CHMP2AO43633 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CHMP2AO43633 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
CHMP2AO43633 PTCHD3P3-201ENST00000403073 906 ntBASIC19.42■□□□□ 0.7
CHMP2AO43633 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP2AO43633 RPS15P9-201ENST00000494093 319 ntBASIC19.42■□□□□ 0.7
CHMP2AO43633 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.42■□□□□ 0.7
CHMP2AO43633 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.42■□□□□ 0.7
CHMP2AO43633 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP2AO43633 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.42■□□□□ 0.7
CHMP2AO43633 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CHMP2AO43633 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP2AO43633 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.42■□□□□ 0.7
CHMP2AO43633 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP2AO43633 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP2AO43633 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP2AO43633 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.41■□□□□ 0.7
CHMP2AO43633 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP2AO43633 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP2AO43633 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP2AO43633 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.41■□□□□ 0.7
CHMP2AO43633 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP2AO43633 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.41■□□□□ 0.7
CHMP2AO43633 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CHMP2AO43633 MIR940-201ENST00000401276 94 ntBASIC19.41■□□□□ 0.7
CHMP2AO43633 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP2AO43633 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.41■□□□□ 0.7
CHMP2AO43633 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP2AO43633 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.41■□□□□ 0.7
CHMP2AO43633 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP2AO43633 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.41■□□□□ 0.7
CHMP2AO43633 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.41■□□□□ 0.7
CHMP2AO43633 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP2AO43633 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP2AO43633 Z83851.2-201ENST00000609564 659 ntBASIC19.41■□□□□ 0.7
CHMP2AO43633 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.41■□□□□ 0.7
CHMP2AO43633 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP2AO43633 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP2AO43633 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP2AO43633 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CHMP2AO43633 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP2AO43633 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP2AO43633 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.41■□□□□ 0.7
CHMP2AO43633 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP2AO43633 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.41■□□□□ 0.7
CHMP2AO43633 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP2AO43633 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP2AO43633 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP2AO43633 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.41■□□□□ 0.7
CHMP2AO43633 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP2AO43633 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CHMP2AO43633 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP2AO43633 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP2AO43633 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CHMP2AO43633 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.4■□□□□ 0.7
CHMP2AO43633 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CHMP2AO43633 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CHMP2AO43633 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP2AO43633 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP2AO43633 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms