Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDC7O00311 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDC7O00311 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.97■□□□□ 0.31
CDC7O00311 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDC7O00311 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDC7O00311 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDC7O00311 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.97■□□□□ 0.31
CDC7O00311 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.97■□□□□ 0.31
CDC7O00311 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CDC7O00311 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDC7O00311 AP000867.4-201ENST00000641616 219 ntBASIC16.97■□□□□ 0.31
CDC7O00311 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CDC7O00311 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDC7O00311 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDC7O00311 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDC7O00311 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDC7O00311 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.97■□□□□ 0.31
CDC7O00311 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDC7O00311 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.97■□□□□ 0.31
CDC7O00311 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDC7O00311 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDC7O00311 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.97■□□□□ 0.31
CDC7O00311 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDC7O00311 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.96■□□□□ 0.31
CDC7O00311 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDC7O00311 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.96■□□□□ 0.31
CDC7O00311 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDC7O00311 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDC7O00311 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDC7O00311 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CDC7O00311 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
CDC7O00311 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.96■□□□□ 0.31
CDC7O00311 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.96■□□□□ 0.31
CDC7O00311 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDC7O00311 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.96■□□□□ 0.31
CDC7O00311 MIR5100-201ENST00000579544 119 ntBASIC16.96■□□□□ 0.31
CDC7O00311 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDC7O00311 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDC7O00311 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CDC7O00311 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDC7O00311 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDC7O00311 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDC7O00311 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CDC7O00311 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.96■□□□□ 0.31
CDC7O00311 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDC7O00311 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDC7O00311 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDC7O00311 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDC7O00311 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CDC7O00311 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDC7O00311 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDC7O00311 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDC7O00311 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDC7O00311 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDC7O00311 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CDC7O00311 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.3
CDC7O00311 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
CDC7O00311 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDC7O00311 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDC7O00311 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDC7O00311 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDC7O00311 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CDC7O00311 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.95■□□□□ 0.3
CDC7O00311 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDC7O00311 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDC7O00311 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.95■□□□□ 0.3
CDC7O00311 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDC7O00311 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDC7O00311 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDC7O00311 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
CDC7O00311 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.95■□□□□ 0.3
CDC7O00311 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.95■□□□□ 0.3
CDC7O00311 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.95■□□□□ 0.3
CDC7O00311 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.95■□□□□ 0.3
CDC7O00311 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.95■□□□□ 0.3
CDC7O00311 AC138894.3-201ENST00000603787 634 ntBASIC16.95■□□□□ 0.3
CDC7O00311 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.95■□□□□ 0.3
CDC7O00311 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.95■□□□□ 0.3
CDC7O00311 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CDC7O00311 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDC7O00311 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
CDC7O00311 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CDC7O00311 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDC7O00311 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDC7O00311 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDC7O00311 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDC7O00311 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDC7O00311 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDC7O00311 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDC7O00311 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CDC7O00311 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDC7O00311 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDC7O00311 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.94■□□□□ 0.3
CDC7O00311 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDC7O00311 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDC7O00311 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDC7O00311 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDC7O00311 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.94■□□□□ 0.3
CDC7O00311 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDC7O00311 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms