Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.47■□□□□ 0.39
AP3B1O00203 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.47■□□□□ 0.39
AP3B1O00203 AP000867.4-201ENST00000641616 219 ntBASIC17.47■□□□□ 0.39
AP3B1O00203 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP3B1O00203 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.47■□□□□ 0.39
AP3B1O00203 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP3B1O00203 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP3B1O00203 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP3B1O00203 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP3B1O00203 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP3B1O00203 CROCCP1-201ENST00000426910 5675 ntBASIC17.47■□□□□ 0.39
AP3B1O00203 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
AP3B1O00203 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP3B1O00203 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.47■□□□□ 0.39
AP3B1O00203 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
AP3B1O00203 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP3B1O00203 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
AP3B1O00203 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP3B1O00203 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
AP3B1O00203 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
AP3B1O00203 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP3B1O00203 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
AP3B1O00203 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP3B1O00203 RCN1P2-201ENST00000398357 915 ntBASIC17.46■□□□□ 0.39
AP3B1O00203 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
AP3B1O00203 AP002490.2-201ENST00000524791 560 ntBASIC17.46■□□□□ 0.39
AP3B1O00203 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP3B1O00203 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
AP3B1O00203 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.46■□□□□ 0.39
AP3B1O00203 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
AP3B1O00203 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.46■□□□□ 0.39
AP3B1O00203 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP3B1O00203 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP3B1O00203 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.46■□□□□ 0.39
AP3B1O00203 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP3B1O00203 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP3B1O00203 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP3B1O00203 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.46■□□□□ 0.39
AP3B1O00203 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP3B1O00203 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP3B1O00203 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
AP3B1O00203 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
AP3B1O00203 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
AP3B1O00203 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
AP3B1O00203 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
AP3B1O00203 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
AP3B1O00203 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
AP3B1O00203 NKILA-202ENST00000614771 2598 ntBASIC17.45■□□□□ 0.38
AP3B1O00203 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP3B1O00203 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
AP3B1O00203 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
AP3B1O00203 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP3B1O00203 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
AP3B1O00203 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP3B1O00203 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP3B1O00203 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
AP3B1O00203 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP3B1O00203 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.45■□□□□ 0.38
AP3B1O00203 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP3B1O00203 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP3B1O00203 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.45■□□□□ 0.38
AP3B1O00203 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
AP3B1O00203 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
AP3B1O00203 ATP5G2P1-201ENST00000433580 426 ntBASIC17.45■□□□□ 0.38
AP3B1O00203 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
AP3B1O00203 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.45■□□□□ 0.38
AP3B1O00203 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.45■□□□□ 0.38
AP3B1O00203 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.45■□□□□ 0.38
AP3B1O00203 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
AP3B1O00203 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.45■□□□□ 0.38
AP3B1O00203 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.45■□□□□ 0.38
AP3B1O00203 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
AP3B1O00203 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
AP3B1O00203 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
AP3B1O00203 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
AP3B1O00203 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
AP3B1O00203 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP3B1O00203 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP3B1O00203 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
AP3B1O00203 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
AP3B1O00203 SIGLEC16-201ENST00000599858 1437 ntBASIC17.45■□□□□ 0.38
AP3B1O00203 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP3B1O00203 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP3B1O00203 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
AP3B1O00203 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP3B1O00203 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP3B1O00203 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
AP3B1O00203 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
AP3B1O00203 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
AP3B1O00203 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
AP3B1O00203 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
AP3B1O00203 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3B1O00203 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3B1O00203 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3B1O00203 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3B1O00203 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3B1O00203 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3B1O00203 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.44■□□□□ 0.38
AP3B1O00203 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3B1O00203 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms