Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV5-3A0A0A0MS03 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TRBV5-3A0A0A0MS03 TUBB8P12-201ENST00000308911 1335 ntBASIC16.17■□□□□ 0.18
TRBV5-3A0A0A0MS03 TUBB7P-202ENST00000428444 1305 ntBASIC16.17■□□□□ 0.18
TRBV5-3A0A0A0MS03 TUBB8P7-204ENST00000567960 1332 ntBASIC16.17■□□□□ 0.18
TRBV5-3A0A0A0MS03 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
TRBV5-3A0A0A0MS03 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 AP002490.2-201ENST00000524791 560 ntBASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 AL136038.3-201ENST00000561909 1096 ntBASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 AC073592.5-201ENST00000624854 528 ntBASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 AL391256.1-201ENST00000443260 1855 ntBASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV5-3A0A0A0MS03 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV5-3A0A0A0MS03 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.15■□□□□ 0.18
TRBV5-3A0A0A0MS03 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.15■□□□□ 0.18
TRBV5-3A0A0A0MS03 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.15■□□□□ 0.18
TRBV5-3A0A0A0MS03 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
TRBV5-3A0A0A0MS03 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV5-3A0A0A0MS03 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TRBV5-3A0A0A0MS03 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV5-3A0A0A0MS03 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.15■□□□□ 0.18
TRBV5-3A0A0A0MS03 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.15■□□□□ 0.18
TRBV5-3A0A0A0MS03 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV5-3A0A0A0MS03 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV5-3A0A0A0MS03 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV5-3A0A0A0MS03 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV5-3A0A0A0MS03 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV5-3A0A0A0MS03 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.15■□□□□ 0.18
TRBV5-3A0A0A0MS03 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.15■□□□□ 0.18
TRBV5-3A0A0A0MS03 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.15■□□□□ 0.18
TRBV5-3A0A0A0MS03 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.15■□□□□ 0.18
TRBV5-3A0A0A0MS03 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
TRBV5-3A0A0A0MS03 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV5-3A0A0A0MS03 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.15■□□□□ 0.18
TRBV5-3A0A0A0MS03 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV5-3A0A0A0MS03 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.15■□□□□ 0.18
TRBV5-3A0A0A0MS03 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.15■□□□□ 0.18
TRBV5-3A0A0A0MS03 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.15■□□□□ 0.18
TRBV5-3A0A0A0MS03 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.15■□□□□ 0.18
TRBV5-3A0A0A0MS03 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV5-3A0A0A0MS03 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.15■□□□□ 0.18
TRBV5-3A0A0A0MS03 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.15■□□□□ 0.18
TRBV5-3A0A0A0MS03 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV5-3A0A0A0MS03 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.15■□□□□ 0.18
TRBV5-3A0A0A0MS03 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV5-3A0A0A0MS03 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV5-3A0A0A0MS03 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.15■□□□□ 0.18
TRBV5-3A0A0A0MS03 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
TRBV5-3A0A0A0MS03 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.15■□□□□ 0.18
TRBV5-3A0A0A0MS03 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV5-3A0A0A0MS03 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV5-3A0A0A0MS03 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV5-3A0A0A0MS03 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV5-3A0A0A0MS03 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TRBV5-3A0A0A0MS03 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV5-3A0A0A0MS03 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
TRBV5-3A0A0A0MS03 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
TRBV5-3A0A0A0MS03 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms