Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.74■□□□□ 0.75
CLIC4Q9Y696 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.74■□□□□ 0.75
CLIC4Q9Y696 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.74■□□□□ 0.75
CLIC4Q9Y696 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLIC4Q9Y696 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLIC4Q9Y696 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CLIC4Q9Y696 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLIC4Q9Y696 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLIC4Q9Y696 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLIC4Q9Y696 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.74■□□□□ 0.75
CLIC4Q9Y696 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.74■□□□□ 0.75
CLIC4Q9Y696 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLIC4Q9Y696 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CLIC4Q9Y696 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLIC4Q9Y696 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLIC4Q9Y696 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.73■□□□□ 0.75
CLIC4Q9Y696 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLIC4Q9Y696 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
CLIC4Q9Y696 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLIC4Q9Y696 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.73■□□□□ 0.75
CLIC4Q9Y696 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
CLIC4Q9Y696 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.73■□□□□ 0.75
CLIC4Q9Y696 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLIC4Q9Y696 FRMD8P1-201ENST00000440433 1524 ntBASIC19.73■□□□□ 0.75
CLIC4Q9Y696 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLIC4Q9Y696 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.73■□□□□ 0.75
CLIC4Q9Y696 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLIC4Q9Y696 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CLIC4Q9Y696 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
CLIC4Q9Y696 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLIC4Q9Y696 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
CLIC4Q9Y696 AC124947.2-201ENST00000547118 1133 ntBASIC19.73■□□□□ 0.75
CLIC4Q9Y696 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
CLIC4Q9Y696 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.73■□□□□ 0.75
CLIC4Q9Y696 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.73■□□□□ 0.75
CLIC4Q9Y696 AL445228.2-201ENST00000605589 952 ntBASIC19.73■□□□□ 0.75
CLIC4Q9Y696 AC069148.1-201ENST00000608741 768 ntBASIC19.73■□□□□ 0.75
CLIC4Q9Y696 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.73■□□□□ 0.75
CLIC4Q9Y696 AC114341.1-201ENST00000618070 349 ntBASIC19.73■□□□□ 0.75
CLIC4Q9Y696 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.73■□□□□ 0.75
CLIC4Q9Y696 AP000867.4-201ENST00000641616 219 ntBASIC19.73■□□□□ 0.75
CLIC4Q9Y696 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.73■□□□□ 0.75
CLIC4Q9Y696 AC092171.3-201ENST00000610122 2651 ntBASIC19.73■□□□□ 0.75
CLIC4Q9Y696 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLIC4Q9Y696 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLIC4Q9Y696 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CLIC4Q9Y696 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CLIC4Q9Y696 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLIC4Q9Y696 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLIC4Q9Y696 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLIC4Q9Y696 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLIC4Q9Y696 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLIC4Q9Y696 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLIC4Q9Y696 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CLIC4Q9Y696 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.72■□□□□ 0.75
CLIC4Q9Y696 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLIC4Q9Y696 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLIC4Q9Y696 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLIC4Q9Y696 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.72■□□□□ 0.75
CLIC4Q9Y696 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLIC4Q9Y696 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.72■□□□□ 0.75
CLIC4Q9Y696 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLIC4Q9Y696 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.72■□□□□ 0.75
CLIC4Q9Y696 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.72■□□□□ 0.75
CLIC4Q9Y696 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLIC4Q9Y696 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.72■□□□□ 0.75
CLIC4Q9Y696 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.72■□□□□ 0.75
CLIC4Q9Y696 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLIC4Q9Y696 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.72■□□□□ 0.75
CLIC4Q9Y696 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.72■□□□□ 0.75
CLIC4Q9Y696 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.72■□□□□ 0.75
CLIC4Q9Y696 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.72■□□□□ 0.75
CLIC4Q9Y696 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLIC4Q9Y696 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.72■□□□□ 0.75
CLIC4Q9Y696 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLIC4Q9Y696 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CLIC4Q9Y696 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLIC4Q9Y696 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.72■□□□□ 0.75
CLIC4Q9Y696 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.72■□□□□ 0.75
CLIC4Q9Y696 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLIC4Q9Y696 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLIC4Q9Y696 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CLIC4Q9Y696 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLIC4Q9Y696 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLIC4Q9Y696 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CLIC4Q9Y696 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLIC4Q9Y696 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.71■□□□□ 0.75
CLIC4Q9Y696 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLIC4Q9Y696 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.71■□□□□ 0.75
CLIC4Q9Y696 AC104819.1-201ENST00000504587 486 ntBASIC19.71■□□□□ 0.75
CLIC4Q9Y696 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLIC4Q9Y696 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.71■□□□□ 0.75
CLIC4Q9Y696 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.71■□□□□ 0.75
CLIC4Q9Y696 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CLIC4Q9Y696 AC092329.2-201ENST00000598402 547 ntBASIC19.71■□□□□ 0.75
CLIC4Q9Y696 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.71■□□□□ 0.75
CLIC4Q9Y696 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLIC4Q9Y696 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLIC4Q9Y696 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLIC4Q9Y696 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms