Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.4■□□□□ 0.22
AP4S1Q9Y587 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP4S1Q9Y587 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.4■□□□□ 0.22
AP4S1Q9Y587 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.4■□□□□ 0.22
AP4S1Q9Y587 AC113404.2-201ENST00000507884 177 ntBASIC16.4■□□□□ 0.22
AP4S1Q9Y587 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.4■□□□□ 0.22
AP4S1Q9Y587 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.4■□□□□ 0.22
AP4S1Q9Y587 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.4■□□□□ 0.22
AP4S1Q9Y587 AL023803.3-201ENST00000615559 522 ntBASIC16.4■□□□□ 0.22
AP4S1Q9Y587 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.4■□□□□ 0.22
AP4S1Q9Y587 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP4S1Q9Y587 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.4■□□□□ 0.22
AP4S1Q9Y587 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AP4S1Q9Y587 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP4S1Q9Y587 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP4S1Q9Y587 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AP4S1Q9Y587 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
AP4S1Q9Y587 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
AP4S1Q9Y587 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
AP4S1Q9Y587 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP4S1Q9Y587 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP4S1Q9Y587 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.4■□□□□ 0.22
AP4S1Q9Y587 AC092364.2-201ENST00000596710 2692 ntBASIC16.4■□□□□ 0.22
AP4S1Q9Y587 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
AP4S1Q9Y587 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP4S1Q9Y587 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
AP4S1Q9Y587 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.4■□□□□ 0.22
AP4S1Q9Y587 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
AP4S1Q9Y587 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP4S1Q9Y587 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP4S1Q9Y587 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.39■□□□□ 0.21
AP4S1Q9Y587 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP4S1Q9Y587 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.39■□□□□ 0.21
AP4S1Q9Y587 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
AP4S1Q9Y587 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
AP4S1Q9Y587 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
AP4S1Q9Y587 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.39■□□□□ 0.21
AP4S1Q9Y587 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP4S1Q9Y587 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.39■□□□□ 0.21
AP4S1Q9Y587 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.39■□□□□ 0.21
AP4S1Q9Y587 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.39■□□□□ 0.21
AP4S1Q9Y587 AC124947.2-201ENST00000547118 1133 ntBASIC16.39■□□□□ 0.21
AP4S1Q9Y587 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.39■□□□□ 0.21
AP4S1Q9Y587 AL353719.1-201ENST00000566847 864 ntBASIC16.39■□□□□ 0.21
AP4S1Q9Y587 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.39■□□□□ 0.21
AP4S1Q9Y587 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.39■□□□□ 0.21
AP4S1Q9Y587 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP4S1Q9Y587 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP4S1Q9Y587 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.39■□□□□ 0.21
AP4S1Q9Y587 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.39■□□□□ 0.21
AP4S1Q9Y587 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP4S1Q9Y587 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
AP4S1Q9Y587 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP4S1Q9Y587 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP4S1Q9Y587 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
AP4S1Q9Y587 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
AP4S1Q9Y587 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.39■□□□□ 0.21
AP4S1Q9Y587 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP4S1Q9Y587 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.39■□□□□ 0.21
AP4S1Q9Y587 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP4S1Q9Y587 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP4S1Q9Y587 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.39■□□□□ 0.21
AP4S1Q9Y587 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
AP4S1Q9Y587 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP4S1Q9Y587 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP4S1Q9Y587 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.38■□□□□ 0.21
AP4S1Q9Y587 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP4S1Q9Y587 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP4S1Q9Y587 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.38■□□□□ 0.21
AP4S1Q9Y587 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
AP4S1Q9Y587 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP4S1Q9Y587 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
AP4S1Q9Y587 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
AP4S1Q9Y587 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.38■□□□□ 0.21
AP4S1Q9Y587 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP4S1Q9Y587 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
AP4S1Q9Y587 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP4S1Q9Y587 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.38■□□□□ 0.21
AP4S1Q9Y587 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
AP4S1Q9Y587 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.38■□□□□ 0.21
AP4S1Q9Y587 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.38■□□□□ 0.21
AP4S1Q9Y587 TSPY17P-201ENST00000450329 467 ntBASIC16.38■□□□□ 0.21
AP4S1Q9Y587 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.38■□□□□ 0.21
AP4S1Q9Y587 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.38■□□□□ 0.21
AP4S1Q9Y587 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
AP4S1Q9Y587 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.38■□□□□ 0.21
AP4S1Q9Y587 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
AP4S1Q9Y587 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP4S1Q9Y587 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
AP4S1Q9Y587 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP4S1Q9Y587 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.38■□□□□ 0.21
AP4S1Q9Y587 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.38■□□□□ 0.21
AP4S1Q9Y587 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP4S1Q9Y587 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP4S1Q9Y587 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP4S1Q9Y587 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP4S1Q9Y587 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
AP4S1Q9Y587 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
AP4S1Q9Y587 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
AP4S1Q9Y587 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms