Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.25■□□□□ 0.35
SPASTQ9UBP0 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
SPASTQ9UBP0 AC004817.3-201ENST00000602957 2129 ntBASIC17.25■□□□□ 0.35
SPASTQ9UBP0 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPASTQ9UBP0 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPASTQ9UBP0 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.25■□□□□ 0.35
SPASTQ9UBP0 BX276092.7-203ENST00000637198 1536 ntBASIC17.25■□□□□ 0.35
SPASTQ9UBP0 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.25■□□□□ 0.35
SPASTQ9UBP0 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SPASTQ9UBP0 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
SPASTQ9UBP0 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPASTQ9UBP0 GNAS-203ENST00000306120 1878 ntBASIC17.24■□□□□ 0.35
SPASTQ9UBP0 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.24■□□□□ 0.35
SPASTQ9UBP0 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SPASTQ9UBP0 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPASTQ9UBP0 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPASTQ9UBP0 AL049757.1-201ENST00000616842 1596 ntBASIC17.24■□□□□ 0.35
SPASTQ9UBP0 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SPASTQ9UBP0 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SPASTQ9UBP0 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPASTQ9UBP0 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPASTQ9UBP0 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPASTQ9UBP0 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SPASTQ9UBP0 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPASTQ9UBP0 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPASTQ9UBP0 AC003669.1-201ENST00000334569 611 ntBASIC17.24■□□□□ 0.35
SPASTQ9UBP0 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPASTQ9UBP0 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPASTQ9UBP0 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.24■□□□□ 0.35
SPASTQ9UBP0 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SPASTQ9UBP0 KLF4P1-201ENST00000412782 1185 ntBASIC17.24■□□□□ 0.35
SPASTQ9UBP0 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.24■□□□□ 0.35
SPASTQ9UBP0 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.24■□□□□ 0.35
SPASTQ9UBP0 KRT18P27-201ENST00000427733 1299 ntBASIC17.24■□□□□ 0.35
SPASTQ9UBP0 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.24■□□□□ 0.35
SPASTQ9UBP0 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.24■□□□□ 0.35
SPASTQ9UBP0 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
SPASTQ9UBP0 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.24■□□□□ 0.35
SPASTQ9UBP0 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.24■□□□□ 0.35
SPASTQ9UBP0 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.24■□□□□ 0.35
SPASTQ9UBP0 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPASTQ9UBP0 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.24■□□□□ 0.35
SPASTQ9UBP0 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPASTQ9UBP0 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPASTQ9UBP0 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPASTQ9UBP0 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.24■□□□□ 0.35
SPASTQ9UBP0 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPASTQ9UBP0 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SPASTQ9UBP0 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SPASTQ9UBP0 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPASTQ9UBP0 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPASTQ9UBP0 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SPASTQ9UBP0 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.24■□□□□ 0.35
SPASTQ9UBP0 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPASTQ9UBP0 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPASTQ9UBP0 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SPASTQ9UBP0 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SPASTQ9UBP0 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SPASTQ9UBP0 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SPASTQ9UBP0 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.23■□□□□ 0.35
SPASTQ9UBP0 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SPASTQ9UBP0 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SPASTQ9UBP0 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SPASTQ9UBP0 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
SPASTQ9UBP0 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SPASTQ9UBP0 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SPASTQ9UBP0 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
SPASTQ9UBP0 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SPASTQ9UBP0 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SPASTQ9UBP0 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SPASTQ9UBP0 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.23■□□□□ 0.35
SPASTQ9UBP0 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SPASTQ9UBP0 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.23■□□□□ 0.35
SPASTQ9UBP0 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SPASTQ9UBP0 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SPASTQ9UBP0 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.23■□□□□ 0.35
SPASTQ9UBP0 DDX43P3-201ENST00000441064 443 ntBASIC17.23■□□□□ 0.35
SPASTQ9UBP0 SIGLEC30P-201ENST00000455569 941 ntBASIC17.23■□□□□ 0.35
SPASTQ9UBP0 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.23■□□□□ 0.35
SPASTQ9UBP0 AC136632.2-201ENST00000512891 861 ntBASIC17.23■□□□□ 0.35
SPASTQ9UBP0 RNA5SP416-201ENST00000516838 111 ntBASIC17.23■□□□□ 0.35
SPASTQ9UBP0 PGAM5P1-201ENST00000518923 814 ntBASIC17.23■□□□□ 0.35
SPASTQ9UBP0 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SPASTQ9UBP0 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.23■□□□□ 0.35
SPASTQ9UBP0 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.23■□□□□ 0.35
SPASTQ9UBP0 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.23■□□□□ 0.35
SPASTQ9UBP0 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
SPASTQ9UBP0 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SPASTQ9UBP0 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SPASTQ9UBP0 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SPASTQ9UBP0 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SPASTQ9UBP0 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.23■□□□□ 0.35
SPASTQ9UBP0 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SPASTQ9UBP0 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.23■□□□□ 0.35
SPASTQ9UBP0 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SPASTQ9UBP0 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SPASTQ9UBP0 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.23■□□□□ 0.35
SPASTQ9UBP0 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SPASTQ9UBP0 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SPASTQ9UBP0 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms