Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ECHDC1Q9NTX5 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ECHDC1Q9NTX5 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ECHDC1Q9NTX5 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC21.03■□□□□ 0.96
ECHDC1Q9NTX5 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ECHDC1Q9NTX5 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC21.03■□□□□ 0.96
ECHDC1Q9NTX5 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ECHDC1Q9NTX5 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC21.03■□□□□ 0.96
ECHDC1Q9NTX5 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC21.03■□□□□ 0.96
ECHDC1Q9NTX5 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC21.03■□□□□ 0.96
ECHDC1Q9NTX5 SLC25A6P4-201ENST00000586535 553 ntBASIC21.03■□□□□ 0.96
ECHDC1Q9NTX5 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC21.03■□□□□ 0.96
ECHDC1Q9NTX5 FAM215A-202ENST00000632077 792 ntBASIC21.03■□□□□ 0.96
ECHDC1Q9NTX5 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ECHDC1Q9NTX5 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
ECHDC1Q9NTX5 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
ECHDC1Q9NTX5 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ECHDC1Q9NTX5 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ECHDC1Q9NTX5 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
ECHDC1Q9NTX5 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ECHDC1Q9NTX5 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ECHDC1Q9NTX5 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
ECHDC1Q9NTX5 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
ECHDC1Q9NTX5 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
ECHDC1Q9NTX5 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ECHDC1Q9NTX5 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
ECHDC1Q9NTX5 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ECHDC1Q9NTX5 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ECHDC1Q9NTX5 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ECHDC1Q9NTX5 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ECHDC1Q9NTX5 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC21.02■□□□□ 0.96
ECHDC1Q9NTX5 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ECHDC1Q9NTX5 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ECHDC1Q9NTX5 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ECHDC1Q9NTX5 AC073621.1-201ENST00000392730 636 ntBASIC21.02■□□□□ 0.96
ECHDC1Q9NTX5 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC21.02■□□□□ 0.96
ECHDC1Q9NTX5 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ECHDC1Q9NTX5 ELK2BP-201ENST00000415014 1224 ntBASIC21.02■□□□□ 0.96
ECHDC1Q9NTX5 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC21.02■□□□□ 0.96
ECHDC1Q9NTX5 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ECHDC1Q9NTX5 RNA5SP419-201ENST00000515908 135 ntBASIC21.02■□□□□ 0.96
ECHDC1Q9NTX5 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21.02■□□□□ 0.96
ECHDC1Q9NTX5 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC21.02■□□□□ 0.96
ECHDC1Q9NTX5 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC21.02■□□□□ 0.96
ECHDC1Q9NTX5 AC012640.2-201ENST00000561606 901 ntBASIC21.02■□□□□ 0.96
ECHDC1Q9NTX5 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
ECHDC1Q9NTX5 AL773604.1-201ENST00000617417 272 ntBASIC21.02■□□□□ 0.96
ECHDC1Q9NTX5 AC008735.5-201ENST00000623544 497 ntBASIC21.02■□□□□ 0.96
ECHDC1Q9NTX5 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ECHDC1Q9NTX5 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ECHDC1Q9NTX5 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ECHDC1Q9NTX5 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ECHDC1Q9NTX5 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC21.02■□□□□ 0.96
ECHDC1Q9NTX5 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ECHDC1Q9NTX5 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC21.02■□□□□ 0.96
ECHDC1Q9NTX5 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC21.02■□□□□ 0.95
ECHDC1Q9NTX5 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC21.02■□□□□ 0.95
ECHDC1Q9NTX5 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
ECHDC1Q9NTX5 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
ECHDC1Q9NTX5 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ECHDC1Q9NTX5 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
ECHDC1Q9NTX5 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ECHDC1Q9NTX5 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
ECHDC1Q9NTX5 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ECHDC1Q9NTX5 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ECHDC1Q9NTX5 NABP1-203ENST00000409510 843 ntTSL 5 BASIC21.01■□□□□ 0.95
ECHDC1Q9NTX5 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC21.01■□□□□ 0.95
ECHDC1Q9NTX5 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC21.01■□□□□ 0.95
ECHDC1Q9NTX5 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
ECHDC1Q9NTX5 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ECHDC1Q9NTX5 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
ECHDC1Q9NTX5 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC21.01■□□□□ 0.95
ECHDC1Q9NTX5 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
ECHDC1Q9NTX5 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ECHDC1Q9NTX5 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ECHDC1Q9NTX5 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
ECHDC1Q9NTX5 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC21■□□□□ 0.95
ECHDC1Q9NTX5 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
ECHDC1Q9NTX5 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC21■□□□□ 0.95
ECHDC1Q9NTX5 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
ECHDC1Q9NTX5 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC21■□□□□ 0.95
ECHDC1Q9NTX5 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC21■□□□□ 0.95
ECHDC1Q9NTX5 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ECHDC1Q9NTX5 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC21■□□□□ 0.95
ECHDC1Q9NTX5 AL031284.1-201ENST00000419297 478 ntBASIC21■□□□□ 0.95
ECHDC1Q9NTX5 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC21■□□□□ 0.95
ECHDC1Q9NTX5 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC21■□□□□ 0.95
ECHDC1Q9NTX5 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC21■□□□□ 0.95
ECHDC1Q9NTX5 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC21■□□□□ 0.95
ECHDC1Q9NTX5 AL049840.3-201ENST00000602669 611 ntBASIC21■□□□□ 0.95
ECHDC1Q9NTX5 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
ECHDC1Q9NTX5 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC21■□□□□ 0.95
ECHDC1Q9NTX5 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC21■□□□□ 0.95
ECHDC1Q9NTX5 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC21■□□□□ 0.95
ECHDC1Q9NTX5 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC21■□□□□ 0.95
ECHDC1Q9NTX5 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC21■□□□□ 0.95
ECHDC1Q9NTX5 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ECHDC1Q9NTX5 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ECHDC1Q9NTX5 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ECHDC1Q9NTX5 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms