Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.58■□□□□ 0.4
LRRC40Q9H9A6 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC40Q9H9A6 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC40Q9H9A6 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.58■□□□□ 0.4
LRRC40Q9H9A6 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC40Q9H9A6 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.58■□□□□ 0.4
LRRC40Q9H9A6 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.58■□□□□ 0.4
LRRC40Q9H9A6 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.58■□□□□ 0.4
LRRC40Q9H9A6 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.58■□□□□ 0.4
LRRC40Q9H9A6 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.58■□□□□ 0.4
LRRC40Q9H9A6 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC40Q9H9A6 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC40Q9H9A6 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.58■□□□□ 0.4
LRRC40Q9H9A6 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC40Q9H9A6 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC40Q9H9A6 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
LRRC40Q9H9A6 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC40Q9H9A6 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
LRRC40Q9H9A6 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
LRRC40Q9H9A6 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC40Q9H9A6 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC40Q9H9A6 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
LRRC40Q9H9A6 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC40Q9H9A6 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
LRRC40Q9H9A6 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC40Q9H9A6 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC40Q9H9A6 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
LRRC40Q9H9A6 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.57■□□□□ 0.4
LRRC40Q9H9A6 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC40Q9H9A6 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.57■□□□□ 0.4
LRRC40Q9H9A6 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.57■□□□□ 0.4
LRRC40Q9H9A6 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.57■□□□□ 0.4
LRRC40Q9H9A6 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC40Q9H9A6 AC093458.2-201ENST00000623150 629 ntBASIC17.57■□□□□ 0.4
LRRC40Q9H9A6 AP000867.4-201ENST00000641616 219 ntBASIC17.57■□□□□ 0.4
LRRC40Q9H9A6 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.57■□□□□ 0.4
LRRC40Q9H9A6 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC40Q9H9A6 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
LRRC40Q9H9A6 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC40Q9H9A6 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.57■□□□□ 0.4
LRRC40Q9H9A6 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC40Q9H9A6 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC40Q9H9A6 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC40Q9H9A6 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC40Q9H9A6 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC40Q9H9A6 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
LRRC40Q9H9A6 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC40Q9H9A6 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.57■□□□□ 0.4
LRRC40Q9H9A6 EGFEM1P-202ENST00000431685 1563 ntBASIC17.57■□□□□ 0.4
LRRC40Q9H9A6 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC40Q9H9A6 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.57■□□□□ 0.4
LRRC40Q9H9A6 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.57■□□□□ 0.4
LRRC40Q9H9A6 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC40Q9H9A6 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC40Q9H9A6 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC40Q9H9A6 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC40Q9H9A6 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC40Q9H9A6 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC40Q9H9A6 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC40Q9H9A6 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC40Q9H9A6 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC40Q9H9A6 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC40Q9H9A6 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
LRRC40Q9H9A6 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.56■□□□□ 0.4
LRRC40Q9H9A6 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC40Q9H9A6 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
LRRC40Q9H9A6 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.56■□□□□ 0.4
LRRC40Q9H9A6 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC40Q9H9A6 NUS1P2-201ENST00000417358 873 ntBASIC17.56■□□□□ 0.4
LRRC40Q9H9A6 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
LRRC40Q9H9A6 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC40Q9H9A6 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.56■□□□□ 0.4
LRRC40Q9H9A6 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.56■□□□□ 0.4
LRRC40Q9H9A6 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC40Q9H9A6 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC40Q9H9A6 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.56■□□□□ 0.4
LRRC40Q9H9A6 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC40Q9H9A6 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.56■□□□□ 0.4
LRRC40Q9H9A6 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
LRRC40Q9H9A6 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.56■□□□□ 0.4
LRRC40Q9H9A6 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC40Q9H9A6 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
LRRC40Q9H9A6 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
LRRC40Q9H9A6 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC40Q9H9A6 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
LRRC40Q9H9A6 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
LRRC40Q9H9A6 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.56■□□□□ 0.4
LRRC40Q9H9A6 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC40Q9H9A6 AC099398.1-201ENST00000567919 2776 ntBASIC17.56■□□□□ 0.4
LRRC40Q9H9A6 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
LRRC40Q9H9A6 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
LRRC40Q9H9A6 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC40Q9H9A6 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.55■□□□□ 0.4
LRRC40Q9H9A6 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC40Q9H9A6 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC40Q9H9A6 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC40Q9H9A6 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.55■□□□□ 0.4
LRRC40Q9H9A6 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.55■□□□□ 0.4
LRRC40Q9H9A6 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC40Q9H9A6 AL020989.1-201ENST00000422979 469 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms