Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC20.12■□□□□ 0.81
SH2D4AQ9H788 ALG1L5P-201ENST00000482043 771 ntBASIC20.12■□□□□ 0.81
SH2D4AQ9H788 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC20.12■□□□□ 0.81
SH2D4AQ9H788 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC20.12■□□□□ 0.81
SH2D4AQ9H788 KRT19P2-202ENST00000557173 1012 ntBASIC20.12■□□□□ 0.81
SH2D4AQ9H788 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC20.12■□□□□ 0.81
SH2D4AQ9H788 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SH2D4AQ9H788 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SH2D4AQ9H788 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SH2D4AQ9H788 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SH2D4AQ9H788 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SH2D4AQ9H788 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SH2D4AQ9H788 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SH2D4AQ9H788 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SH2D4AQ9H788 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SH2D4AQ9H788 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SH2D4AQ9H788 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SH2D4AQ9H788 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC20.12■□□□□ 0.81
SH2D4AQ9H788 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.12■□□□□ 0.81
SH2D4AQ9H788 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
SH2D4AQ9H788 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SH2D4AQ9H788 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SH2D4AQ9H788 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
SH2D4AQ9H788 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SH2D4AQ9H788 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
SH2D4AQ9H788 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SH2D4AQ9H788 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SH2D4AQ9H788 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SH2D4AQ9H788 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SH2D4AQ9H788 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SH2D4AQ9H788 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SH2D4AQ9H788 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SH2D4AQ9H788 HTR5BP-201ENST00000430851 1154 ntBASIC20.11■□□□□ 0.81
SH2D4AQ9H788 DNAJB3-202ENST00000449667 1266 ntBASIC20.11■□□□□ 0.81
SH2D4AQ9H788 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC20.11■□□□□ 0.81
SH2D4AQ9H788 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC20.11■□□□□ 0.81
SH2D4AQ9H788 MIR4469-201ENST00000583919 79 ntBASIC20.11■□□□□ 0.81
SH2D4AQ9H788 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC20.11■□□□□ 0.81
SH2D4AQ9H788 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SH2D4AQ9H788 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SH2D4AQ9H788 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC20.11■□□□□ 0.81
SH2D4AQ9H788 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SH2D4AQ9H788 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SH2D4AQ9H788 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SH2D4AQ9H788 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
SH2D4AQ9H788 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SH2D4AQ9H788 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.1■□□□□ 0.81
SH2D4AQ9H788 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
SH2D4AQ9H788 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
SH2D4AQ9H788 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
SH2D4AQ9H788 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SH2D4AQ9H788 AC006116.8-202ENST00000587620 1550 ntBASIC20.1■□□□□ 0.81
SH2D4AQ9H788 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SH2D4AQ9H788 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
SH2D4AQ9H788 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SH2D4AQ9H788 PAWRP1-201ENST00000451083 565 ntBASIC20.1■□□□□ 0.81
SH2D4AQ9H788 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC20.1■□□□□ 0.81
SH2D4AQ9H788 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
SH2D4AQ9H788 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC20.1■□□□□ 0.81
SH2D4AQ9H788 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.1■□□□□ 0.81
SH2D4AQ9H788 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC20.1■□□□□ 0.81
SH2D4AQ9H788 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.1■□□□□ 0.81
SH2D4AQ9H788 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC20.1■□□□□ 0.81
SH2D4AQ9H788 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SH2D4AQ9H788 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SH2D4AQ9H788 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SH2D4AQ9H788 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.1■□□□□ 0.81
SH2D4AQ9H788 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SH2D4AQ9H788 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.1■□□□□ 0.81
SH2D4AQ9H788 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SH2D4AQ9H788 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SH2D4AQ9H788 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.09■□□□□ 0.81
SH2D4AQ9H788 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SH2D4AQ9H788 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
SH2D4AQ9H788 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SH2D4AQ9H788 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SH2D4AQ9H788 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
SH2D4AQ9H788 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SH2D4AQ9H788 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC20.09■□□□□ 0.81
SH2D4AQ9H788 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC20.09■□□□□ 0.81
SH2D4AQ9H788 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SH2D4AQ9H788 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
SH2D4AQ9H788 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SH2D4AQ9H788 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC20.09■□□□□ 0.81
SH2D4AQ9H788 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC20.09■□□□□ 0.81
SH2D4AQ9H788 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SH2D4AQ9H788 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SH2D4AQ9H788 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SH2D4AQ9H788 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SH2D4AQ9H788 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
SH2D4AQ9H788 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.09■□□□□ 0.81
SH2D4AQ9H788 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SH2D4AQ9H788 AC025580.3-201ENST00000617932 1424 ntBASIC20.09■□□□□ 0.81
SH2D4AQ9H788 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SH2D4AQ9H788 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SH2D4AQ9H788 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SH2D4AQ9H788 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SH2D4AQ9H788 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SH2D4AQ9H788 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC20.08■□□□□ 0.81
SH2D4AQ9H788 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms