Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDK5RAP1Q96SZ6 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDK5RAP1Q96SZ6 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CDK5RAP1Q96SZ6 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
CDK5RAP1Q96SZ6 MIR940-201ENST00000401276 94 ntBASIC17.92■□□□□ 0.46
CDK5RAP1Q96SZ6 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CDK5RAP1Q96SZ6 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDK5RAP1Q96SZ6 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDK5RAP1Q96SZ6 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.92■□□□□ 0.46
CDK5RAP1Q96SZ6 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.92■□□□□ 0.46
CDK5RAP1Q96SZ6 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.92■□□□□ 0.46
CDK5RAP1Q96SZ6 AC004790.2-201ENST00000623588 572 ntBASIC17.92■□□□□ 0.46
CDK5RAP1Q96SZ6 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CDK5RAP1Q96SZ6 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDK5RAP1Q96SZ6 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CDK5RAP1Q96SZ6 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDK5RAP1Q96SZ6 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDK5RAP1Q96SZ6 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDK5RAP1Q96SZ6 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDK5RAP1Q96SZ6 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDK5RAP1Q96SZ6 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDK5RAP1Q96SZ6 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDK5RAP1Q96SZ6 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.92■□□□□ 0.46
CDK5RAP1Q96SZ6 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.91■□□□□ 0.46
CDK5RAP1Q96SZ6 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDK5RAP1Q96SZ6 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.91■□□□□ 0.46
CDK5RAP1Q96SZ6 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.91■□□□□ 0.46
CDK5RAP1Q96SZ6 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDK5RAP1Q96SZ6 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.91■□□□□ 0.46
CDK5RAP1Q96SZ6 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.91■□□□□ 0.46
CDK5RAP1Q96SZ6 PAWRP1-201ENST00000451083 565 ntBASIC17.91■□□□□ 0.46
CDK5RAP1Q96SZ6 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.91■□□□□ 0.46
CDK5RAP1Q96SZ6 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.91■□□□□ 0.46
CDK5RAP1Q96SZ6 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.91■□□□□ 0.46
CDK5RAP1Q96SZ6 POLD2P1-201ENST00000511220 997 ntBASIC17.91■□□□□ 0.46
CDK5RAP1Q96SZ6 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.91■□□□□ 0.46
CDK5RAP1Q96SZ6 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.91■□□□□ 0.46
CDK5RAP1Q96SZ6 AC064836.3-201ENST00000607928 673 ntBASIC17.91■□□□□ 0.46
CDK5RAP1Q96SZ6 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDK5RAP1Q96SZ6 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.91■□□□□ 0.46
CDK5RAP1Q96SZ6 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.91■□□□□ 0.46
CDK5RAP1Q96SZ6 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDK5RAP1Q96SZ6 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.91■□□□□ 0.46
CDK5RAP1Q96SZ6 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDK5RAP1Q96SZ6 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.91■□□□□ 0.46
CDK5RAP1Q96SZ6 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CDK5RAP1Q96SZ6 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.91■□□□□ 0.46
CDK5RAP1Q96SZ6 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
CDK5RAP1Q96SZ6 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDK5RAP1Q96SZ6 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDK5RAP1Q96SZ6 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CDK5RAP1Q96SZ6 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDK5RAP1Q96SZ6 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.9■□□□□ 0.46
CDK5RAP1Q96SZ6 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDK5RAP1Q96SZ6 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.9■□□□□ 0.46
CDK5RAP1Q96SZ6 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDK5RAP1Q96SZ6 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.9■□□□□ 0.46
CDK5RAP1Q96SZ6 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.9■□□□□ 0.46
CDK5RAP1Q96SZ6 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CDK5RAP1Q96SZ6 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.9■□□□□ 0.46
CDK5RAP1Q96SZ6 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
CDK5RAP1Q96SZ6 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.9■□□□□ 0.46
CDK5RAP1Q96SZ6 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.9■□□□□ 0.46
CDK5RAP1Q96SZ6 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
CDK5RAP1Q96SZ6 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.9■□□□□ 0.46
CDK5RAP1Q96SZ6 AC040169.1-201ENST00000565382 521 ntBASIC17.9■□□□□ 0.46
CDK5RAP1Q96SZ6 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.9■□□□□ 0.46
CDK5RAP1Q96SZ6 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.9■□□□□ 0.46
CDK5RAP1Q96SZ6 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.9■□□□□ 0.46
CDK5RAP1Q96SZ6 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDK5RAP1Q96SZ6 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
CDK5RAP1Q96SZ6 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDK5RAP1Q96SZ6 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CDK5RAP1Q96SZ6 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
CDK5RAP1Q96SZ6 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
CDK5RAP1Q96SZ6 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDK5RAP1Q96SZ6 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CDK5RAP1Q96SZ6 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDK5RAP1Q96SZ6 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDK5RAP1Q96SZ6 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.9■□□□□ 0.46
CDK5RAP1Q96SZ6 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDK5RAP1Q96SZ6 AC007613.1-201ENST00000572811 2597 ntBASIC17.89■□□□□ 0.46
CDK5RAP1Q96SZ6 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CDK5RAP1Q96SZ6 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.89■□□□□ 0.46
CDK5RAP1Q96SZ6 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
CDK5RAP1Q96SZ6 AC020916.1-201ENST00000587762 1774 ntBASIC17.89■□□□□ 0.45
CDK5RAP1Q96SZ6 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDK5RAP1Q96SZ6 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.89■□□□□ 0.45
CDK5RAP1Q96SZ6 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CDK5RAP1Q96SZ6 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDK5RAP1Q96SZ6 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDK5RAP1Q96SZ6 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDK5RAP1Q96SZ6 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.89■□□□□ 0.45
CDK5RAP1Q96SZ6 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDK5RAP1Q96SZ6 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CDK5RAP1Q96SZ6 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.89■□□□□ 0.45
CDK5RAP1Q96SZ6 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.89■□□□□ 0.45
CDK5RAP1Q96SZ6 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.89■□□□□ 0.45
CDK5RAP1Q96SZ6 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CDK5RAP1Q96SZ6 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms