Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CSPG4P5Q96PW8 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CSPG4P5Q96PW8 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CSPG4P5Q96PW8 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
CSPG4P5Q96PW8 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CSPG4P5Q96PW8 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CSPG4P5Q96PW8 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
CSPG4P5Q96PW8 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CSPG4P5Q96PW8 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CSPG4P5Q96PW8 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CSPG4P5Q96PW8 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CSPG4P5Q96PW8 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSPG4P5Q96PW8 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSPG4P5Q96PW8 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CSPG4P5Q96PW8 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSPG4P5Q96PW8 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSPG4P5Q96PW8 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CSPG4P5Q96PW8 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
CSPG4P5Q96PW8 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSPG4P5Q96PW8 LINC00982-205ENST00000420957 435 ntBASIC17.82■□□□□ 0.44
CSPG4P5Q96PW8 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CSPG4P5Q96PW8 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.82■□□□□ 0.44
CSPG4P5Q96PW8 AC008608.2-201ENST00000606089 416 ntBASIC17.82■□□□□ 0.44
CSPG4P5Q96PW8 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.82■□□□□ 0.44
CSPG4P5Q96PW8 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSPG4P5Q96PW8 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CSPG4P5Q96PW8 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSPG4P5Q96PW8 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CSPG4P5Q96PW8 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.82■□□□□ 0.44
CSPG4P5Q96PW8 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.82■□□□□ 0.44
CSPG4P5Q96PW8 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSPG4P5Q96PW8 AC009053.2-201ENST00000563701 2365 ntBASIC17.82■□□□□ 0.44
CSPG4P5Q96PW8 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSPG4P5Q96PW8 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CSPG4P5Q96PW8 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSPG4P5Q96PW8 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSPG4P5Q96PW8 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CSPG4P5Q96PW8 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSPG4P5Q96PW8 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CSPG4P5Q96PW8 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSPG4P5Q96PW8 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSPG4P5Q96PW8 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.81■□□□□ 0.44
CSPG4P5Q96PW8 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CSPG4P5Q96PW8 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.81■□□□□ 0.44
CSPG4P5Q96PW8 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSPG4P5Q96PW8 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CSPG4P5Q96PW8 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.81■□□□□ 0.44
CSPG4P5Q96PW8 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSPG4P5Q96PW8 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CSPG4P5Q96PW8 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
CSPG4P5Q96PW8 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSPG4P5Q96PW8 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CSPG4P5Q96PW8 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CSPG4P5Q96PW8 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CSPG4P5Q96PW8 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.81■□□□□ 0.44
CSPG4P5Q96PW8 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.81■□□□□ 0.44
CSPG4P5Q96PW8 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.81■□□□□ 0.44
CSPG4P5Q96PW8 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSPG4P5Q96PW8 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.81■□□□□ 0.44
CSPG4P5Q96PW8 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.81■□□□□ 0.44
CSPG4P5Q96PW8 IFNL4P1-201ENST00000607083 540 ntBASIC17.81■□□□□ 0.44
CSPG4P5Q96PW8 AL022326.1-202ENST00000641533 845 ntBASIC17.81■□□□□ 0.44
CSPG4P5Q96PW8 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.81■□□□□ 0.44
CSPG4P5Q96PW8 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CSPG4P5Q96PW8 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSPG4P5Q96PW8 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.81■□□□□ 0.44
CSPG4P5Q96PW8 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSPG4P5Q96PW8 GPR89P-201ENST00000407924 1495 ntBASIC17.81■□□□□ 0.44
CSPG4P5Q96PW8 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSPG4P5Q96PW8 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSPG4P5Q96PW8 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSPG4P5Q96PW8 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.8■□□□□ 0.44
CSPG4P5Q96PW8 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSPG4P5Q96PW8 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSPG4P5Q96PW8 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSPG4P5Q96PW8 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.8■□□□□ 0.44
CSPG4P5Q96PW8 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CSPG4P5Q96PW8 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSPG4P5Q96PW8 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSPG4P5Q96PW8 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSPG4P5Q96PW8 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.8■□□□□ 0.44
CSPG4P5Q96PW8 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CSPG4P5Q96PW8 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.8■□□□□ 0.44
CSPG4P5Q96PW8 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSPG4P5Q96PW8 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.8■□□□□ 0.44
CSPG4P5Q96PW8 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.8■□□□□ 0.44
CSPG4P5Q96PW8 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.8■□□□□ 0.44
CSPG4P5Q96PW8 SAPCD2P3-201ENST00000455031 850 ntBASIC17.8■□□□□ 0.44
CSPG4P5Q96PW8 UNC93B7-201ENST00000509439 705 ntBASIC17.8■□□□□ 0.44
CSPG4P5Q96PW8 SART3-203ENST00000546611 1184 ntBASIC17.8■□□□□ 0.44
CSPG4P5Q96PW8 AC124947.2-201ENST00000547118 1133 ntBASIC17.8■□□□□ 0.44
CSPG4P5Q96PW8 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.8■□□□□ 0.44
CSPG4P5Q96PW8 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.8■□□□□ 0.44
CSPG4P5Q96PW8 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.8■□□□□ 0.44
CSPG4P5Q96PW8 LINC01711-201ENST00000598340 967 ntBASIC17.8■□□□□ 0.44
CSPG4P5Q96PW8 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CSPG4P5Q96PW8 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSPG4P5Q96PW8 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CSPG4P5Q96PW8 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CSPG4P5Q96PW8 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms