Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
GAFA1Q96PS6 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GAFA1Q96PS6 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
GAFA1Q96PS6 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
GAFA1Q96PS6 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GAFA1Q96PS6 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GAFA1Q96PS6 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
GAFA1Q96PS6 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GAFA1Q96PS6 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
GAFA1Q96PS6 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.37□□□□□ -0.11
GAFA1Q96PS6 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.37□□□□□ -0.11
GAFA1Q96PS6 HNRNPDP1-201ENST00000439535 754 ntBASIC14.37□□□□□ -0.11
GAFA1Q96PS6 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.37□□□□□ -0.11
GAFA1Q96PS6 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.37□□□□□ -0.11
GAFA1Q96PS6 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GAFA1Q96PS6 AC004706.3-202ENST00000621574 984 ntBASIC14.37□□□□□ -0.11
GAFA1Q96PS6 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
GAFA1Q96PS6 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GAFA1Q96PS6 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GAFA1Q96PS6 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
GAFA1Q96PS6 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GAFA1Q96PS6 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GAFA1Q96PS6 LINC02012-201ENST00000608206 1725 ntBASIC14.37□□□□□ -0.11
GAFA1Q96PS6 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GAFA1Q96PS6 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
GAFA1Q96PS6 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
GAFA1Q96PS6 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.37□□□□□ -0.11
GAFA1Q96PS6 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GAFA1Q96PS6 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GAFA1Q96PS6 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GAFA1Q96PS6 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GAFA1Q96PS6 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GAFA1Q96PS6 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GAFA1Q96PS6 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GAFA1Q96PS6 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
GAFA1Q96PS6 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.36□□□□□ -0.11
GAFA1Q96PS6 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GAFA1Q96PS6 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GAFA1Q96PS6 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
GAFA1Q96PS6 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GAFA1Q96PS6 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GAFA1Q96PS6 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
GAFA1Q96PS6 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.36□□□□□ -0.11
GAFA1Q96PS6 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.36□□□□□ -0.11
GAFA1Q96PS6 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.36□□□□□ -0.11
GAFA1Q96PS6 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.36□□□□□ -0.11
GAFA1Q96PS6 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC14.36□□□□□ -0.11
GAFA1Q96PS6 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.36□□□□□ -0.11
GAFA1Q96PS6 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.36□□□□□ -0.11
GAFA1Q96PS6 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.36□□□□□ -0.11
GAFA1Q96PS6 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
GAFA1Q96PS6 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
GAFA1Q96PS6 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GAFA1Q96PS6 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
GAFA1Q96PS6 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
GAFA1Q96PS6 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.36□□□□□ -0.11
GAFA1Q96PS6 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
GAFA1Q96PS6 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
GAFA1Q96PS6 AL590787.1-201ENST00000568856 1315 ntBASIC14.36□□□□□ -0.11
GAFA1Q96PS6 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GAFA1Q96PS6 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GAFA1Q96PS6 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
GAFA1Q96PS6 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC14.35□□□□□ -0.11
GAFA1Q96PS6 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GAFA1Q96PS6 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
GAFA1Q96PS6 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.35□□□□□ -0.11
GAFA1Q96PS6 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GAFA1Q96PS6 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC14.35□□□□□ -0.11
GAFA1Q96PS6 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
GAFA1Q96PS6 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GAFA1Q96PS6 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GAFA1Q96PS6 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.35□□□□□ -0.11
GAFA1Q96PS6 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.35□□□□□ -0.11
GAFA1Q96PS6 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
GAFA1Q96PS6 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.35□□□□□ -0.11
GAFA1Q96PS6 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
GAFA1Q96PS6 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC14.35□□□□□ -0.11
GAFA1Q96PS6 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
GAFA1Q96PS6 AP001094.4-201ENST00000579008 2176 ntBASIC14.35□□□□□ -0.11
GAFA1Q96PS6 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.35□□□□□ -0.11
GAFA1Q96PS6 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.35□□□□□ -0.11
GAFA1Q96PS6 MRPL3P1-201ENST00000400109 1033 ntBASIC14.35□□□□□ -0.11
GAFA1Q96PS6 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.35□□□□□ -0.11
GAFA1Q96PS6 ELK2BP-201ENST00000415014 1224 ntBASIC14.35□□□□□ -0.11
GAFA1Q96PS6 AC009078.2-202ENST00000463353 338 ntBASIC14.35□□□□□ -0.11
GAFA1Q96PS6 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.35□□□□□ -0.11
GAFA1Q96PS6 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GAFA1Q96PS6 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.35□□□□□ -0.11
GAFA1Q96PS6 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
GAFA1Q96PS6 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.35□□□□□ -0.11
GAFA1Q96PS6 AC006557.2-201ENST00000592985 1240 ntBASIC14.35□□□□□ -0.11
GAFA1Q96PS6 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
GAFA1Q96PS6 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.35□□□□□ -0.11
GAFA1Q96PS6 AL773604.1-201ENST00000617417 272 ntBASIC14.35□□□□□ -0.11
GAFA1Q96PS6 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.35□□□□□ -0.11
GAFA1Q96PS6 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
GAFA1Q96PS6 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
GAFA1Q96PS6 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
GAFA1Q96PS6 GPR89P-201ENST00000407924 1495 ntBASIC14.35□□□□□ -0.11
GAFA1Q96PS6 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms