Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.52■□□□□ 0.24
SLC46A1Q96NT5 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.52■□□□□ 0.24
SLC46A1Q96NT5 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SLC46A1Q96NT5 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SLC46A1Q96NT5 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC46A1Q96NT5 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.52■□□□□ 0.24
SLC46A1Q96NT5 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.52■□□□□ 0.24
SLC46A1Q96NT5 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SLC46A1Q96NT5 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.52■□□□□ 0.24
SLC46A1Q96NT5 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.52■□□□□ 0.24
SLC46A1Q96NT5 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.52■□□□□ 0.24
SLC46A1Q96NT5 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC46A1Q96NT5 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.52■□□□□ 0.24
SLC46A1Q96NT5 AL353135.1-201ENST00000606729 504 ntBASIC16.52■□□□□ 0.24
SLC46A1Q96NT5 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
SLC46A1Q96NT5 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC46A1Q96NT5 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.52■□□□□ 0.23
SLC46A1Q96NT5 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SLC46A1Q96NT5 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SLC46A1Q96NT5 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
SLC46A1Q96NT5 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SLC46A1Q96NT5 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SLC46A1Q96NT5 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
SLC46A1Q96NT5 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.52■□□□□ 0.23
SLC46A1Q96NT5 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SLC46A1Q96NT5 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
SLC46A1Q96NT5 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SLC46A1Q96NT5 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 NOC2LP2-201ENST00000407594 1944 ntBASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 HLA-J-203ENST00000494367 1087 ntBASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 IGHV3-52-201ENST00000519770 353 ntBASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 AC105339.1-204ENST00000636249 355 ntBASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 AC092902.6-201ENST00000641783 218 ntBASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 AC006116.8-202ENST00000587620 1550 ntBASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.51■□□□□ 0.23
SLC46A1Q96NT5 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.5■□□□□ 0.23
SLC46A1Q96NT5 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC46A1Q96NT5 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC46A1Q96NT5 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SLC46A1Q96NT5 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
SLC46A1Q96NT5 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC46A1Q96NT5 BX276092.7-203ENST00000637198 1536 ntBASIC16.5■□□□□ 0.23
SLC46A1Q96NT5 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC46A1Q96NT5 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC46A1Q96NT5 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC46A1Q96NT5 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC46A1Q96NT5 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC46A1Q96NT5 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
SLC46A1Q96NT5 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC46A1Q96NT5 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.5■□□□□ 0.23
SLC46A1Q96NT5 AC004461.1-201ENST00000412461 403 ntBASIC16.5■□□□□ 0.23
SLC46A1Q96NT5 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.5■□□□□ 0.23
SLC46A1Q96NT5 LINC00982-205ENST00000420957 435 ntBASIC16.5■□□□□ 0.23
SLC46A1Q96NT5 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC46A1Q96NT5 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SLC46A1Q96NT5 COX20P2-201ENST00000452636 358 ntBASIC16.5■□□□□ 0.23
SLC46A1Q96NT5 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.5■□□□□ 0.23
SLC46A1Q96NT5 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.5■□□□□ 0.23
SLC46A1Q96NT5 AC025678.2-201ENST00000562061 970 ntBASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms