Protein–RNA interactions for Protein: Q96MD7

C9orf85, Uncharacterized protein C9orf85, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85Q96MD7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
C9orf85Q96MD7 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC12.55□□□□□ -0.4
C9orf85Q96MD7 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
C9orf85Q96MD7 AC246785.2-201ENST00000432512 513 ntBASIC12.55□□□□□ -0.4
C9orf85Q96MD7 AC104076.2-201ENST00000448912 469 ntBASIC12.55□□□□□ -0.4
C9orf85Q96MD7 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
C9orf85Q96MD7 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
C9orf85Q96MD7 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC12.55□□□□□ -0.4
C9orf85Q96MD7 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
C9orf85Q96MD7 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
C9orf85Q96MD7 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC12.55□□□□□ -0.4
C9orf85Q96MD7 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
C9orf85Q96MD7 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC12.55□□□□□ -0.4
C9orf85Q96MD7 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
C9orf85Q96MD7 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC12.55□□□□□ -0.4
C9orf85Q96MD7 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
C9orf85Q96MD7 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
C9orf85Q96MD7 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
C9orf85Q96MD7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC12.55□□□□□ -0.4
C9orf85Q96MD7 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
C9orf85Q96MD7 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
C9orf85Q96MD7 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
C9orf85Q96MD7 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC12.55□□□□□ -0.4
C9orf85Q96MD7 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
C9orf85Q96MD7 STX3-203ENST00000529177 1571 ntTSL 2 BASIC12.55□□□□□ -0.4
C9orf85Q96MD7 AC009336.1-201ENST00000608941 1553 ntBASIC12.55□□□□□ -0.4
C9orf85Q96MD7 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
C9orf85Q96MD7 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC12.55□□□□□ -0.4
C9orf85Q96MD7 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
C9orf85Q96MD7 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC12.55□□□□□ -0.4
C9orf85Q96MD7 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC12.55□□□□□ -0.4
C9orf85Q96MD7 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC12.55□□□□□ -0.4
C9orf85Q96MD7 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
C9orf85Q96MD7 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
C9orf85Q96MD7 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC12.55□□□□□ -0.4
C9orf85Q96MD7 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC12.55□□□□□ -0.4
C9orf85Q96MD7 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
C9orf85Q96MD7 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC12.55□□□□□ -0.4
C9orf85Q96MD7 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 AL139384.1-201ENST00000612143 3047 ntBASIC12.54□□□□□ -0.4
C9orf85Q96MD7 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 AC092068.3-201ENST00000587894 2016 ntBASIC12.54□□□□□ -0.4
C9orf85Q96MD7 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 PCDHB19P-201ENST00000570871 2371 ntBASIC12.54□□□□□ -0.4
C9orf85Q96MD7 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 DAP-202ENST00000432074 1048 ntTSL 2 BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 STK19B-204ENST00000512515 211 ntBASIC12.54□□□□□ -0.4
C9orf85Q96MD7 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 LTBR-211ENST00000543190 785 ntTSL 3 BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 PPOX-219ENST00000544598 813 ntTSL 2 BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 LINC01238-205ENST00000567549 1107 ntBASIC12.54□□□□□ -0.4
C9orf85Q96MD7 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 LINC01023-201ENST00000606054 436 ntBASIC12.54□□□□□ -0.4
C9orf85Q96MD7 IGHV3-41-201ENST00000613121 348 ntBASIC12.54□□□□□ -0.4
C9orf85Q96MD7 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 AL135999.2-201ENST00000622438 1686 ntBASIC12.54□□□□□ -0.4
C9orf85Q96MD7 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC12.54□□□□□ -0.4
C9orf85Q96MD7 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
C9orf85Q96MD7 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
C9orf85Q96MD7 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms