Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 REXO1L3P-201ENST00000622202 1288 ntBASIC20.07■□□□□ 0.8
CCDC17Q96LX7 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC20.07■□□□□ 0.8
CCDC17Q96LX7 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC17Q96LX7 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC17Q96LX7 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC17Q96LX7 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC17Q96LX7 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC17Q96LX7 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC17Q96LX7 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC17Q96LX7 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC17Q96LX7 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC17Q96LX7 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC17Q96LX7 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC17Q96LX7 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC17Q96LX7 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC17Q96LX7 NEK7-201ENST00000367383 586 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC17Q96LX7 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC17Q96LX7 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC17Q96LX7 FALEC-201ENST00000416894 566 ntTSL 3 BASIC20.06■□□□□ 0.8
CCDC17Q96LX7 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC17Q96LX7 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC17Q96LX7 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CCDC17Q96LX7 CEND1P1-201ENST00000451006 455 ntBASIC20.06■□□□□ 0.8
CCDC17Q96LX7 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CCDC17Q96LX7 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC20.06■□□□□ 0.8
CCDC17Q96LX7 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC17Q96LX7 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC17Q96LX7 RPL28-209ENST00000560055 670 ntTSL 3 BASIC20.06■□□□□ 0.8
CCDC17Q96LX7 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC17Q96LX7 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC20.06■□□□□ 0.8
CCDC17Q96LX7 AL645728.2-201ENST00000641974 660 ntBASIC20.06■□□□□ 0.8
CCDC17Q96LX7 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC17Q96LX7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CCDC17Q96LX7 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC17Q96LX7 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC17Q96LX7 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC17Q96LX7 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC17Q96LX7 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC17Q96LX7 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC17Q96LX7 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CCDC17Q96LX7 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC17Q96LX7 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC17Q96LX7 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC17Q96LX7 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CCDC17Q96LX7 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC17Q96LX7 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC17Q96LX7 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CCDC17Q96LX7 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CCDC17Q96LX7 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC17Q96LX7 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC17Q96LX7 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC17Q96LX7 AL031432.2-201ENST00000566714 459 ntBASIC20.05■□□□□ 0.8
CCDC17Q96LX7 AL928711.1-201ENST00000570165 459 ntBASIC20.05■□□□□ 0.8
CCDC17Q96LX7 AP002472.1-201ENST00000577490 586 ntBASIC20.05■□□□□ 0.8
CCDC17Q96LX7 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC17Q96LX7 AC091812.2-201ENST00000619081 385 ntBASIC20.05■□□□□ 0.8
CCDC17Q96LX7 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC17Q96LX7 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CCDC17Q96LX7 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC17Q96LX7 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC17Q96LX7 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC17Q96LX7 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CCDC17Q96LX7 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC17Q96LX7 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CCDC17Q96LX7 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC17Q96LX7 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
CCDC17Q96LX7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC17Q96LX7 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC17Q96LX7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC17Q96LX7 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CCDC17Q96LX7 AC093525.9-201ENST00000624961 1746 ntBASIC20.05■□□□□ 0.8
CCDC17Q96LX7 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC17Q96LX7 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC17Q96LX7 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC17Q96LX7 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC17Q96LX7 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC17Q96LX7 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC17Q96LX7 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC17Q96LX7 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC17Q96LX7 SLC25A1P3-201ENST00000395415 828 ntBASIC20.04■□□□□ 0.8
CCDC17Q96LX7 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC17Q96LX7 NMU-203ENST00000507338 658 ntTSL 3 BASIC20.04■□□□□ 0.8
CCDC17Q96LX7 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC20.04■□□□□ 0.8
CCDC17Q96LX7 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC17Q96LX7 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC17Q96LX7 MMP17-203ENST00000535004 719 ntTSL 3 BASIC20.04■□□□□ 0.8
CCDC17Q96LX7 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CCDC17Q96LX7 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC17Q96LX7 BSG-214ENST00000614867 960 ntTSL 3 BASIC20.04■□□□□ 0.8
CCDC17Q96LX7 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC17Q96LX7 CITED2-204ENST00000618718 901 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC17Q96LX7 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC17Q96LX7 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC17Q96LX7 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC17Q96LX7 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC17Q96LX7 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC17Q96LX7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC17Q96LX7 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC17Q96LX7 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC17Q96LX7 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms