Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.62■□□□□ 0.41
RTP4Q96DX8 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
RTP4Q96DX8 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.62■□□□□ 0.41
RTP4Q96DX8 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTP4Q96DX8 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTP4Q96DX8 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTP4Q96DX8 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
RTP4Q96DX8 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RTP4Q96DX8 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTP4Q96DX8 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.62■□□□□ 0.41
RTP4Q96DX8 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.62■□□□□ 0.41
RTP4Q96DX8 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTP4Q96DX8 AL020989.1-201ENST00000422979 469 ntBASIC17.62■□□□□ 0.41
RTP4Q96DX8 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.62■□□□□ 0.41
RTP4Q96DX8 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.62■□□□□ 0.41
RTP4Q96DX8 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTP4Q96DX8 AC074051.2-201ENST00000565115 352 ntBASIC17.62■□□□□ 0.41
RTP4Q96DX8 AC012615.1-201ENST00000565797 1299 ntBASIC17.62■□□□□ 0.41
RTP4Q96DX8 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.62■□□□□ 0.41
RTP4Q96DX8 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.62■□□□□ 0.41
RTP4Q96DX8 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.62■□□□□ 0.41
RTP4Q96DX8 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.62■□□□□ 0.41
RTP4Q96DX8 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTP4Q96DX8 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.62■□□□□ 0.41
RTP4Q96DX8 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.62■□□□□ 0.41
RTP4Q96DX8 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
RTP4Q96DX8 RNF216P1-203ENST00000404404 2427 ntBASIC17.62■□□□□ 0.41
RTP4Q96DX8 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTP4Q96DX8 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
RTP4Q96DX8 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTP4Q96DX8 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTP4Q96DX8 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RTP4Q96DX8 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RTP4Q96DX8 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTP4Q96DX8 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.61■□□□□ 0.41
RTP4Q96DX8 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTP4Q96DX8 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTP4Q96DX8 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTP4Q96DX8 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTP4Q96DX8 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTP4Q96DX8 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTP4Q96DX8 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.61■□□□□ 0.41
RTP4Q96DX8 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTP4Q96DX8 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.61■□□□□ 0.41
RTP4Q96DX8 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTP4Q96DX8 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTP4Q96DX8 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTP4Q96DX8 AC004870.1-201ENST00000315132 882 ntBASIC17.61■□□□□ 0.41
RTP4Q96DX8 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
RTP4Q96DX8 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
RTP4Q96DX8 SIGLEC30P-201ENST00000455569 941 ntBASIC17.61■□□□□ 0.41
RTP4Q96DX8 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.61■□□□□ 0.41
RTP4Q96DX8 UNC93B7-201ENST00000509439 705 ntBASIC17.61■□□□□ 0.41
RTP4Q96DX8 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.61■□□□□ 0.41
RTP4Q96DX8 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.61■□□□□ 0.41
RTP4Q96DX8 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTP4Q96DX8 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.61■□□□□ 0.41
RTP4Q96DX8 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTP4Q96DX8 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RTP4Q96DX8 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.61■□□□□ 0.41
RTP4Q96DX8 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RTP4Q96DX8 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RTP4Q96DX8 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.61■□□□□ 0.41
RTP4Q96DX8 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTP4Q96DX8 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTP4Q96DX8 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.61■□□□□ 0.41
RTP4Q96DX8 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.61■□□□□ 0.41
RTP4Q96DX8 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.6■□□□□ 0.41
RTP4Q96DX8 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.6■□□□□ 0.41
RTP4Q96DX8 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTP4Q96DX8 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTP4Q96DX8 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTP4Q96DX8 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RTP4Q96DX8 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTP4Q96DX8 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTP4Q96DX8 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.6■□□□□ 0.41
RTP4Q96DX8 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTP4Q96DX8 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
RTP4Q96DX8 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTP4Q96DX8 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
RTP4Q96DX8 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RTP4Q96DX8 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTP4Q96DX8 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTP4Q96DX8 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTP4Q96DX8 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTP4Q96DX8 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTP4Q96DX8 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTP4Q96DX8 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.6■□□□□ 0.41
RTP4Q96DX8 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.6■□□□□ 0.41
RTP4Q96DX8 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTP4Q96DX8 AC104819.1-201ENST00000504587 486 ntBASIC17.6■□□□□ 0.41
RTP4Q96DX8 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.6■□□□□ 0.41
RTP4Q96DX8 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.6■□□□□ 0.41
RTP4Q96DX8 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.6■□□□□ 0.41
RTP4Q96DX8 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTP4Q96DX8 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTP4Q96DX8 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTP4Q96DX8 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTP4Q96DX8 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.6■□□□□ 0.41
RTP4Q96DX8 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms