Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HPS1Q92902 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
HPS1Q92902 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
HPS1Q92902 AC006116.8-202ENST00000587620 1550 ntBASIC15.91■□□□□ 0.14
HPS1Q92902 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
HPS1Q92902 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
HPS1Q92902 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HPS1Q92902 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC15.91■□□□□ 0.14
HPS1Q92902 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HPS1Q92902 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
HPS1Q92902 AC105917.1-201ENST00000506637 2539 ntBASIC15.91■□□□□ 0.14
HPS1Q92902 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HPS1Q92902 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.91■□□□□ 0.14
HPS1Q92902 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.91■□□□□ 0.14
HPS1Q92902 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HPS1Q92902 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HPS1Q92902 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HPS1Q92902 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
HPS1Q92902 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HPS1Q92902 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HPS1Q92902 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
HPS1Q92902 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HPS1Q92902 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HPS1Q92902 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HPS1Q92902 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
HPS1Q92902 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HPS1Q92902 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HPS1Q92902 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HPS1Q92902 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HPS1Q92902 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HPS1Q92902 UPK3BP1-201ENST00000428678 509 ntBASIC15.9■□□□□ 0.14
HPS1Q92902 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.9■□□□□ 0.14
HPS1Q92902 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HPS1Q92902 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.9■□□□□ 0.14
HPS1Q92902 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.9■□□□□ 0.14
HPS1Q92902 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.9■□□□□ 0.14
HPS1Q92902 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC15.9■□□□□ 0.14
HPS1Q92902 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.9■□□□□ 0.14
HPS1Q92902 AL358472.4-201ENST00000633140 710 ntBASIC15.9■□□□□ 0.14
HPS1Q92902 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HPS1Q92902 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.9■□□□□ 0.14
HPS1Q92902 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HPS1Q92902 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HPS1Q92902 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HPS1Q92902 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HPS1Q92902 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
HPS1Q92902 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HPS1Q92902 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HPS1Q92902 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HPS1Q92902 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HPS1Q92902 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.14
HPS1Q92902 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
HPS1Q92902 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
HPS1Q92902 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HPS1Q92902 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
HPS1Q92902 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC15.89■□□□□ 0.13
HPS1Q92902 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
HPS1Q92902 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.89■□□□□ 0.13
HPS1Q92902 AL499627.1-201ENST00000569373 2188 ntBASIC15.89■□□□□ 0.13
HPS1Q92902 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HPS1Q92902 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HPS1Q92902 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HPS1Q92902 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.89■□□□□ 0.13
HPS1Q92902 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HPS1Q92902 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HPS1Q92902 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
HPS1Q92902 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HPS1Q92902 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.89■□□□□ 0.13
HPS1Q92902 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HPS1Q92902 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HPS1Q92902 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HPS1Q92902 MCCD1P1-208ENST00000445732 328 ntBASIC15.89■□□□□ 0.13
HPS1Q92902 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.89■□□□□ 0.13
HPS1Q92902 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.89■□□□□ 0.13
HPS1Q92902 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HPS1Q92902 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC15.89■□□□□ 0.13
HPS1Q92902 NEK4P2-201ENST00000580004 1012 ntBASIC15.89■□□□□ 0.13
HPS1Q92902 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.89■□□□□ 0.13
HPS1Q92902 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.89■□□□□ 0.13
HPS1Q92902 AC008622.2-201ENST00000617006 1229 ntBASIC15.89■□□□□ 0.13
HPS1Q92902 AP000550.4-202ENST00000639755 178 ntBASIC15.89■□□□□ 0.13
HPS1Q92902 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HPS1Q92902 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
HPS1Q92902 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HPS1Q92902 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HPS1Q92902 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HPS1Q92902 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
HPS1Q92902 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HPS1Q92902 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
HPS1Q92902 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HPS1Q92902 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
HPS1Q92902 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.89■□□□□ 0.13
HPS1Q92902 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
HPS1Q92902 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HPS1Q92902 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HPS1Q92902 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HPS1Q92902 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
HPS1Q92902 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HPS1Q92902 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.88■□□□□ 0.13
HPS1Q92902 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms